API for selac
Selection Models for Amino Acid and/or Codon Evolution

Global functions
CompareVectors Man page
CreateAADistanceMatrix Man page
CreateAAFixationMatrix Man page
CreateCodonFixationRateMatrix Man page
CreateCodonMutationMatrix Man page
CreateNucleotideMutationMatrix Man page
GetAdequateManyReps Man page
GetAdequateSelac Man page
GetFunctionality Man page
GetLikelihoodSAC_AAForSingleCharGivenOptimum Man page
GetMarginalAllGenes Man page
GetPairwiseProteinFixationProbabilityArbitraryLength Man page
GetPairwiseProteinFixationProbabilitySingleSite Man page
GetPartitionOrder Man page
GetProteinProteinDistance Man page
GetSelacPhiCat Man page
GetSelacSiteLikelihoods Man page
NucSimulator Man page
PlotEquilbriumCodonDistribution Man page
PlotExpectedFitness Man page
PlotGeneSiteInfo Man page
PlotMutationFitnessSpectra Man page
PlotPerAAFitness Man page
SelacOptimize Man page
SelacSimulator Man page
SelacSimulatorEvolvingRates Man page
SelonOptimize Man page
SelonSimulator Man page
TranslateCodon Man page
archosaur Man page
archosaur.phy Man page
model.fit Man page
phy Man page
selac Man page
uce.model.fit Man page
yeast Man page
yeast.gene Man page
selac documentation built on May 1, 2019, 8:19 p.m.