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selection.index: Analysis of Selection Index in Plant Breeding
Provides tools for the simultaneous improvement of multiple traits in plant breeding. Building upon the classical selection index (Smith 1937 <doi:10.1111/j.1469-1809.1936.tb02143.x>) and modern quantitative genetics (Kang 2020 <doi:10.1007/978-3-319-91223-3>), this package calculates classical phenotypic, genomic, marker-assisted, restricted/constrained, and eigen selection indices. It also incorporates multi-stage selection evaluation and stochastic simulations to estimate genetic advance based on economic weights, heritability, and genetic correlations.
Getting started
Package overview
README.md
Constrained Linear Genomic Selection Indices"
Constrained Linear Phenotypic Selection Indices"
Getting Started with selection.index"
Linear Genomic Eigen Selection Index Methods"
Linear Genomic Selection Indices"
Linear Marker and Genome-Wide Selection Indices"
Linear Phenotypic Eigen Selection Index Methods"
Multistage Phenotypic Selection Indices"
Stochastic Simulation of Linear Phenotypic Selection Indices"
The Linear Phenotypic Selection Index Theory"
Browse package contents
Package details |
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| Author | Zankrut Goyani [aut, cre, cph] |
| Maintainer | Zankrut Goyani <zankrut20@gmail.com> |
| License | GPL (>= 3) |
| Version | 2.0.1 |
| URL | https://github.com/zankrut20/selection.index https://zankrut20.github.io/selection.index/ |
| Package repository | View on CRAN |
| Installation |
Install the latest version of this package by entering the following in R:
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