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NEWS.md
In sicegar: Analysis of Single-Cell Viral Growth Curves
sicegar 0.3.0
- Added functionality so that the lower asymptote (h0) can be estimated freely, instead of forced to be zero.
To implement, toggle
use_h0 = TRUE in fitAndCategorize() and figureModelCurves().
- Set default value of
threshold_t0_max_int to 1E10.
- Fixed typo in object assignment of
decisionList$test.sm_tmax_IntensityRatio.
- Fixed typo so that now the asymptote ratio (
parameterDF$finalAsymptoteIntensityRatio_Estimate) is also unnormalized, along with all other parameters.
- Updated ggplot functions to have current syntax.
- Edited grammar and spelling throughout.
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sicegar documentation built on Nov. 16, 2025, 1:07 a.m.
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sicegar 0.3.0
- Added functionality so that the lower asymptote (h0) can be estimated freely, instead of forced to be zero.
To implement, toggle
use_h0 = TRUEinfitAndCategorize()andfigureModelCurves(). - Set default value of
threshold_t0_max_intto 1E10. - Fixed typo in object assignment of
decisionList$test.sm_tmax_IntensityRatio. - Fixed typo so that now the asymptote ratio (
parameterDF$finalAsymptoteIntensityRatio_Estimate) is also unnormalized, along with all other parameters. - Updated ggplot functions to have current syntax.
- Edited grammar and spelling throughout.
Try the sicegar package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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