find_nhc: Localize n-, h- and c-region in signal peptide
In signalHsmm: Predict Presence of Signal Peptides
Description
Usage
Arguments
Value
References
Description
Finds borders between distinct regions constituting signal peptides using a heuristic
algorithm.
Usage
1
Arguments
protein
a vector of amino acids or object of class
SeqFastaAA.
signal
range of signal peptide. If NULL, the attribute sig
of protein will be used.
Value
a vector of length 4 containing positions of:
start of n-region,
start of h-region,
start of c-region,
cleavage site.
References
Henrik Nielsen, Anders Krogh (1998). Prediction of signal peptides
and signal anchors by a hidden Markov model. Proc. Sixth Int. Conf. on
Intelligent Systems for Molecular Biology.
signalHsmm documentation built on May 1, 2019, 7:55 p.m.
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Description Usage Arguments Value References
Description
Finds borders between distinct regions constituting signal peptides using a heuristic algorithm.
Usage
1 |
Arguments
protein |
a vector of amino acids or object of class
|
signal |
range of signal peptide. If |
Value
a vector of length 4 containing positions of:
start of n-region,
start of h-region,
start of c-region,
cleavage site.
References
Henrik Nielsen, Anders Krogh (1998). Prediction of signal peptides and signal anchors by a hidden Markov model. Proc. Sixth Int. Conf. on Intelligent Systems for Molecular Biology.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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