ts_vcf: Save genotypes from the tree sequence as a VCF file
In slendr: A Simulation Framework for Spatiotemporal Population Genetics
ts_vcf R Documentation
Save genotypes from the tree sequence as a VCF file
Description
Save genotypes from the tree sequence as a VCF file
Usage
ts_vcf(ts, path, chrom = NULL, individuals = NULL)
Arguments
ts
Tree sequence object of the class slendr_ts
path
Path to a VCF file
chrom
Chromosome name to be written in the CHROM column of the VCF
individuals
A character vector of individuals in the tree sequence. If
missing, all individuals present in the tree sequence will be saved.
Value
No return value, called for side effects
slendr documentation built on June 22, 2024, 6:56 p.m.
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| ts_vcf | R Documentation |
Save genotypes from the tree sequence as a VCF file
Description
Save genotypes from the tree sequence as a VCF file
Usage
ts_vcf(ts, path, chrom = NULL, individuals = NULL)
Arguments
ts |
Tree sequence object of the class |
path |
Path to a VCF file |
chrom |
Chromosome name to be written in the CHROM column of the VCF |
individuals |
A character vector of individuals in the tree sequence. If missing, all individuals present in the tree sequence will be saved. |
Value
No return value, called for side effects
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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