API for smfishHmrf
Hidden Markov Random Field for Spatial Transcriptomic Data
| Global functions | |
|---|---|
| checkErrors | Man page Source code |
| checkErrorsMulti | Man page Source code |
| checkStopVerbose | Man page Source code |
| checkStopVerboseMulti | Man page Source code |
| findDampFactor | Man page Source code |
| getDen | Man page Source code |
| initialIndices | Man page Source code |
| initialIndicesMulti | Man page Source code |
| relerr | Man page Source code |
| relerr.multi | Man page Source code |
| seqfishplus | Man page |
| smfishHmrf | Man page |
| smfishHmrf.generate.centroid | Man page Source code |
| smfishHmrf.generate.centroid.it | Man page Source code |
| smfishHmrf.generate.centroid.save | Man page Source code |
| smfishHmrf.generate.centroid.use.exist | Man page Source code |
| smfishHmrf.hmrfem | Man page Source code |
| smfishHmrf.hmrfem.multi | Man page Source code |
| smfishHmrf.hmrfem.multi.it | Man page Source code |
| smfishHmrf.hmrfem.multi.it.min | Man page Source code |
| smfishHmrf.hmrfem.multi.save | Man page Source code |
| smfishHmrf.read.expression | Man page Source code |
| updateCovariancesMulti | Source code |
| updateIndicesHMRFEM | Source code |
| updateMeans | Source code |
| updateMeansMulti | Source code |
| updateProbabilities | Source code |
| updateProbabilitiesMulti | Source code |
| updateStdevs | Source code |
| updateUnnormProbabilities | Source code |
| updateUnnormProbabilitiesMulti | Source code |
