smfishHmrf.read.expression: smfishHmrf.read.expression
In smfishHmrf: Hidden Markov Random Field for Spatial Transcriptomic Data
Description
Usage
Arguments
Value
Examples
View source: R/smfishHmrf.hmrfem.R
Description
Reads expression
Usage
1
smfishHmrf.read.expression(expr_file)
Arguments
expr_file
expression matrix file. The expression file should be a space-separated file. The rows are genes. The columns are cells. There is no header row. The first column is a gene index (ranges from 1 to the number of genes). Note the first column is not gene name.
Value
A matrix with gene expression matrix
Examples
1
2
expr_file = system.file("extdata", "ftest.expression.txt", package="smfishHmrf")
y<-smfishHmrf.read.expression(expr_file)
smfishHmrf documentation built on Jan. 13, 2021, 12:54 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
View source: R/smfishHmrf.hmrfem.R
Description
Reads expression
Usage
1 | smfishHmrf.read.expression(expr_file)
|
Arguments
expr_file |
expression matrix file. The expression file should be a space-separated file. The rows are genes. The columns are cells. There is no header row. The first column is a gene index (ranges from 1 to the number of genes). Note the first column is not gene name. |
Value
A matrix with gene expression matrix
Examples
1 2 | expr_file = system.file("extdata", "ftest.expression.txt", package="smfishHmrf")
y<-smfishHmrf.read.expression(expr_file)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.