API for snpEnrichment
SNPs Enrichment Analysis

Global functions
.Chromosome.show	Man page
.EnrichSNP.show	Man page
.Enrichment.show	Man page
.checkFilePath	Man page
.checkSignalFile	Man page
.checkSnpInfoDir	Man page
.checkSnpListDir	Man page
.checkTranscript	Man page
.cleanTmpDir	Man page
.compareEnrich	Man page
.enrichmentRatio	Man page
.reSample	Man page
.readFiles	Man page
.readFreq	Man page
.readLD	Man page
.readSNP	Man page
.readSignal	Man page
.readTranscript	Man page
.showArgs	Man page Man page Man page
.splitByChrom	Man page
.verbose	Man page Man page
.writeFreq	Man page Man page
.writeSignal	Man page Man page
Chromosome	Man page
Chromosome-class	Man page
EnrichSNP	Man page Man page
EnrichSNP,ANY,ANY,ANY,ANY,ANY,ANY-method	Man page
EnrichSNP-class	Man page
EnrichSNP-methods	Man page
Enrichment	Man page
Enrichment-class	Man page
GC	Man page
[,Chromosome,ANY,ANY,ANY-method	Man page
[,Chromosome-method	Man page
[,EnrichSNP,ANY,ANY,ANY-method	Man page
[,EnrichSNP-method	Man page
[,Enrichment,ANY,ANY,ANY-method	Man page
[,Enrichment-method	Man page
[<-,Chromosome,ANY,ANY,ANY-method	Man page
[<-,Chromosome-method	Man page
[<-,EnrichSNP,ANY,ANY,ANY-method	Man page
[<-,EnrichSNP-method	Man page
[<-,Enrichment,ANY,ANY,ANY-method	Man page
[<-,Enrichment-method	Man page
chromosome	Man page
chromosome,ANY,ANY,ANY,ANY-method	Man page
chromosome,ANY-method	Man page
chromosome-methods	Man page
compareEnrichment	Man page
compareEnrichment,ANY,ANY,ANY,ANY,ANY,ANY-method	Man page
compareEnrichment,ANY-method	Man page
compareEnrichment,Enrichment,Enrichment,ANY-method	Man page
compareEnrichment-methods	Man page
computeER	Man page
computeER,ANY-method	Man page
computeER,Chromosome-method	Man page Man page
computeER,Enrichment-method	Man page Man page
doLDblock	Man page
doLDblock,ANY-method	Man page
doLDblock,Chromosome-method	Man page Man page
enrichSNP	Man page
enrichSNP,ANY-method	Man page
enrichSNP-methods	Man page
enrichment	Man page
enrichment,ANY,ANY,ANY,ANY,ANY-method	Man page
enrichment,ANY-method	Man page
enrichment-methods	Man page
excludeSNP	Man page
excludeSNP,ANY,ANY,ANY,ANY,ANY,ANY,ANY-method	Man page
excludeSNP,ANY-method	Man page
excludeSNP,Enrichment,ANY-method	Man page
excludeSNP,Enrichment-method	Man page Man page
excludeSNP-methods	Man page
getEnrichSNP	Man page
getEnrichSNP,ANY-method	Man page
getEnrichSNP,Enrichment,ANY-method	Man page
getEnrichSNP,Enrichment-method	Man page
getEnrichSNP-methods	Man page
initFiles	Man page
is.EnrichSNP	Man page
is.EnrichSNP,ANY-method	Man page
is.EnrichSNP-methods	Man page
is.chromosome	Man page
is.chromosome,ANY-method	Man page
is.chromosome-methods	Man page
is.enrichment	Man page
is.enrichment,ANY-method	Man page
is.enrichment-methods	Man page
mclapply2	Man page
plot	Man page
plot,Enrichment,ANY-method	Man page
plot,Enrichment-method	Man page
plot-methods	Man page
print	Man page
print,Chromosome,ANY,ANY-method	Man page
print,Chromosome-method	Man page Man page
print,EnrichSNP-method	Man page
print,Enrichment,ANY,ANY-method	Man page
print,Enrichment-method	Man page Man page
print-methods	Man page
reSample	Man page
reSample,ANY-method	Man page
reSample,Chromosome,ANY,ANY,ANY,ANY,ANY-method	Man page
reSample,Chromosome,ANY-method	Man page
reSample,Chromosome-method	Man page Man page
reSample,Enrichment,ANY,ANY,ANY,ANY,ANY-method	Man page
reSample,Enrichment,ANY-method	Man page
reSample,Enrichment-method	Man page Man page
reSample-methods	Man page
readEnrichment	Man page
reset	Man page
reset,ANY-method	Man page
reset,Chromosome,ANY-method	Man page
reset,Chromosome-method	Man page Man page
reset,EnrichSNP,ANY-method	Man page
reset,EnrichSNP-method	Man page
reset,Enrichment,ANY-method	Man page
reset,Enrichment-method	Man page Man page
reset-methods	Man page
show,Chromosome-method	Man page
show,EnrichSNP-method	Man page
show,Enrichment-method	Man page
snpEnrichment	Man page
snpEnrichment-package	Man page
toyEnrichment	Man page
toyEnrichment-dataset	Man page
transcript	Man page
transcript-dataset	Man page
writeLD	Man page