Description Usage Arguments Value Author(s) See Also Examples
getEnrichSNP
get all eSNP/xSNP in a Enrichment
object which are significant in the signal according to sigThresh
defined in readEnrichment
.
1 2 | ## S4 method for signature 'Enrichment'
getEnrichSNP(object, type = "eSNP")
|
object |
[Enrichment]: an object of class |
type |
[character]: extract |
Return a data.frame
with eSNP/xSNP which are enriched in signal given to signalFile
in function readEnrichment
.
Mickael Canouil mickael.canouil@good.ibl.fr
Overview : snpEnrichment-package
Classes : Enrichment
, Chromosome
, EnrichSNP
Methods : plot
, reSample
, getEnrichSNP
, excludeSNP
, compareEnrichment
,
enrichment
, is.enrichment
, chromosome
, is.chromosome
Functions : initFiles
, writeLD
, readEnrichment
1 2 3 4 | ## Not run: data(toyEnrichment)
eSNPenriched <- getEnrichSNP(object = toyEnrichment, type = "eSNP")
head(eSNPenriched)
## End(Not run)
|
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