snpStatsWriter: Flexible writing of snpStats objects to flat files

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Write snpStats objects to disk in formats suitable for reading by snphap, phase, mach, IMPUTE, beagle, and (almost) anything else that expects a rectangular format.

Author
Chris Wallace
Date of publication
2013-12-05 17:28:32
Maintainer
Chris Wallace <chris.wallace@cimr.cam.ac.uk>
License
GPL
Version
1.5-6

View on CRAN

Man pages

snpStatsWriter-package
snpStatsWriter
write.beagle
Write a snpStats object in beagle format
write.impute
Write a snpStats object in IMPUTE format
write.mach
Write a snpStats object in mach format
write.phase
Write a snpStats object in PHASE/FastPHASE format
write.sbams
write.sbams
write.simple
Fast and flexible writing of snpStats objects to flat files
write.snphap
Write SNPHAP files

Files in this package

snpStatsWriter
snpStatsWriter/inst
snpStatsWriter/inst/doc
snpStatsWriter/inst/doc/vignette.Rmd
snpStatsWriter/inst/doc/vignette.R
snpStatsWriter/inst/doc/vignette.html
snpStatsWriter/src
snpStatsWriter/src/writers.c
snpStatsWriter/NAMESPACE
snpStatsWriter/R
snpStatsWriter/R/write.R
snpStatsWriter/R/snpStatsWriter-package.R
snpStatsWriter/vignettes
snpStatsWriter/vignettes/vignette.Rmd
snpStatsWriter/MD5
snpStatsWriter/build
snpStatsWriter/build/vignette.rds
snpStatsWriter/DESCRIPTION
snpStatsWriter/ChangeLog
snpStatsWriter/man
snpStatsWriter/man/write.beagle.Rd
snpStatsWriter/man/write.simple.Rd
snpStatsWriter/man/write.sbams.Rd
snpStatsWriter/man/write.phase.Rd
snpStatsWriter/man/write.mach.Rd
snpStatsWriter/man/write.impute.Rd
snpStatsWriter/man/write.snphap.Rd
snpStatsWriter/man/snpStatsWriter-package.Rd