API for solarius
An R Interface to SOLAR
| Global functions | |
|---|---|
| annotate | Man page Source code |
| annotateSNPs | Man page Source code |
| annotateSNPs.NCBI2R | Source code |
| availableTransforms | Man page Source code |
| check_assoc_files_exist | Source code |
| check_var_names | Source code |
| convert_mibd | Source code |
| dat30 | Man page |
| df2solar | Man page Source code |
| explainedVarProp | Man page Source code |
| extractCovariateFrame | Source code |
| extractLoglik | Source code |
| extractVarCompFrame | Source code |
| extract_mod_pvar | Source code |
| extract_out_globals | Source code |
| format_snpdata | Source code |
| genocovdat30 | Man page |
| genocovdata | Man page |
| genodata | Man page |
| getFormulaStr | Man page Source code |
| get_info_mibd | Source code |
| get_proc_poly_assoc | Source code |
| get_proc_write_globals | Source code |
| guess_snpformat | Source code |
| hasHousehold | Source code |
| histKinship2 | Man page Source code |
| imageKinship2 | Man page Source code |
| kf2kmat | Source code |
| kf2phi2 | Source code |
| kf_match_pedindex | Source code |
| kin | Man page |
| kmat2kf | Source code |
| kmat2phi2 | Source code |
| loadExamplesPhen | Man page Source code |
| loadMulticPhen | Man page Source code |
| mapdat30 | Man page |
| matchIdNames | Man page Source code |
| matchMapNames | Man page Source code |
| mf2mat | Source code |
| modelPar | Man page Source code |
| modelParCPUtime | Man page Source code |
| modelParCores | Man page Source code |
| modelParNumBatches | Man page Source code |
| package.file | Man page Source code |
| phenodata | Man page |
| plot.solarAssoc | Man page Source code |
| plot.solarAssoc.old | Source code |
| plot.solarMultipoint | Man page Source code |
| plotKinship2 | Man page Source code |
| plotManh | Man page Source code |
| plotPed | Man page Source code |
| plotQQ | Man page Source code |
| plotRes | Man page Source code |
| plotResQQ | Man page Source code |
| prepare_assoc_files | Source code |
| prepare_multipoint_files | Source code |
| print.solarAssoc | Man page Source code |
| print.solarBaeysAvgPolygenic | Man page Source code |
| print.solarMultipoint | Man page Source code |
| print.solarMultivar | Man page Source code |
| print.solarPolyAssoc | Man page |
| print.solarPolygenic | Man page Source code |
| procc_tprofile | Source code |
| readPhen | Man page Source code |
| read_map | Source code |
| read_map_files | Source code |
| read_mibd_csv_gz | Source code |
| read_mibd_gz | Source code |
| read_multipoint_lod | Source code |
| read_multipoint_lod_bivar | Source code |
| read_multipoint_lod_univar | Source code |
| read_pedindex | Source code |
| read_phi2_gz | Source code |
| read_plink_map | Source code |
| read_plink_ped | Source code |
| read_plink_raw | Source code |
| residuals.solarPolygenic | Man page Source code |
| run_assoc | Source code |
| run_multipoint | Source code |
| run_poly_assoc | Source code |
| set_dir | Source code |
| snpcovdata2solar | Man page Source code |
| snpdata | Man page |
| snpdata2solar | Man page Source code |
| snpmap2solar | Man page Source code |
| solar | Man page Source code |
| solarAssoc | Man page Source code |
| solarAssocClass | Man page |
| solarBaeysAvgPolygenic | Source code |
| solarBaeysAvgPolygenicClass | Man page |
| solarKinship2 | Man page Source code |
| solarMIBD | Source code |
| solarMultipoint | Man page Source code |
| solarMultipointClass | Man page |
| solarMultivar | Source code |
| solarMultivarClass | Man page |
| solarPar | Man page Source code |
| solarParCovlistChi | Man page Source code |
| solarParCovlistP | Man page Source code |
| solarParH2rP | Man page Source code |
| solarParIndividuals | Man page Source code |
| solarParKurtosis | Man page Source code |
| solarParPvar | Man page Source code |
| solarParRhoP | Man page Source code |
| solarParRhoPOK | Man page Source code |
| solarParRhoPP | Man page Source code |
| solarParRhoPSE | Man page Source code |
| solarPolyAssoc | Man page Source code |
| solarPolygenic | Man page Source code |
| solarPolygenicClass | Man page |
| solarReadFiles | Man page Source code |
| solar_assoc | Source code |
| solar_multipoint | Source code |
| solar_polygenic | Source code |
| summary.solarAssoc | Man page Source code |
| summary.solarBaeysAvgPolygenic | Man page Source code |
| summary.solarMultipoint | Man page Source code |
| summary.solarPolygenic | Man page Source code |
| tabplot | Man page Source code |
| tabplot.solarMultipoint | Man page Source code |
| transformData | Man page Source code |
| transformTrait | Man page Source code |
| transform_trait_inormal | Source code |
| transform_trait_log | Source code |
