Files in solarius
An R Interface to SOLAR

TODO
inst
inst/examples
inst/examples/plot-regression.R inst/examples/example-fields.R inst/examples/example-h2r-height-GenABEL.R inst/examples/function-solarMultivar.R inst/examples/solar-multipoint-gait1.R inst/examples/package-multic.R inst/examples/extdata-solarOutput.R inst/examples/function-solarAssoc.R inst/examples/function-solarBayesAvg.R inst/examples/solar-multipoint.R inst/examples/solar-load.R inst/examples/solar-mibd-incomplete.R inst/examples/example-pedfile-snpStats.R inst/examples/example-asssoc-snpStats.R
inst/tests
inst/tests/test-snpmap.R inst/tests/test-solarPar.R inst/tests/test-mgafiles.R inst/tests/test-solarMultipoint.R inst/tests/test-genocov.R inst/tests/test-kinship.R inst/tests/test-not-passed.R inst/tests/test-plinkfiles.R inst/tests/test-solarAssoc-parallel.R inst/tests/test-solarAssoc.R inst/tests/test-household.R inst/tests/test-snplist.R inst/tests/test-annotate.R
inst/extdata
inst/extdata/solarOutput
inst/extdata/solarOutput/simulated.ped
inst/extdata/solarOutput/phi2.gz
inst/extdata/solarOutput/solarMibdsCsvIncomplete
inst/extdata/solarOutput/solarMibdsCsvIncomplete/mibd.5.0.gz
inst/extdata/solarOutput/solarMibdsCsvIncomplete/mibd.5.1.gz
inst/extdata/solarOutput/solarMibds
inst/extdata/solarOutput/solarMibds/mibd.5.3.gz
inst/extdata/solarOutput/solarMibds/mibd.5.0.gz
inst/extdata/solarOutput/solarMibds/mibd.2.1.gz
inst/extdata/solarOutput/solarMibds/mibd.2.5.gz
inst/extdata/solarOutput/solarMibds/mibd.5.5.gz
inst/extdata/solarOutput/solarMibds/mibd.5.1.gz
inst/extdata/solarOutput/solarMibds/mibd.2.0.gz
inst/extdata/solarOutput/solarMibds/mibd.2.3.gz
inst/extdata/solarOutput/solarMibds/mibd.5.2.gz
inst/extdata/solarOutput/solarMibds/mibd.5.4.gz
inst/extdata/solarOutput/solarMibds/mibd.2.2.gz
inst/extdata/solarOutput/solarMibds/mibd.2.4.gz
inst/extdata/solarOutput/simulated.phen
inst/extdata/solarOutput/pedindex.cde
inst/extdata/solarOutput/pedindex.out
inst/extdata/solarOutput/solarMibdsCsv
inst/extdata/solarOutput/solarMibdsCsv/mibd.5.3.gz
inst/extdata/solarOutput/solarMibdsCsv/mibd.5.0.gz
inst/extdata/solarOutput/solarMibdsCsv/mibd.2.1.gz
inst/extdata/solarOutput/solarMibdsCsv/mibd.2.5.gz
inst/extdata/solarOutput/solarMibdsCsv/mibd.5.5.gz
inst/extdata/solarOutput/solarMibdsCsv/mibd.5.1.gz
inst/extdata/solarOutput/solarMibdsCsv/mibd.2.0.gz
inst/extdata/solarOutput/solarMibdsCsv/mibd.2.3.gz
inst/extdata/solarOutput/solarMibdsCsv/mibd.5.2.gz
inst/extdata/solarOutput/solarMibdsCsv/mibd.5.4.gz
inst/extdata/solarOutput/solarMibdsCsv/mibd.2.2.gz
inst/extdata/solarOutput/solarMibdsCsv/mibd.2.4.gz
inst/extdata/solarAssoc
inst/extdata/solarAssoc/ncdf
inst/extdata/solarAssoc/ncdf/dat50.scan
inst/extdata/solarAssoc/ncdf/dat50.snp
inst/extdata/solarAssoc/ncdf/dat50.ncdf
inst/extdata/solarAssoc/snp.genocov4
inst/extdata/solarAssoc/snp.geno-list1
inst/extdata/solarAssoc/dat.snp
inst/extdata/solarAssoc/map.snp.1.2
inst/extdata/solarAssoc/snp.genocov2
inst/extdata/solarAssoc/snp.geno-list
inst/extdata/solarAssoc/snp.genocov
inst/extdata/solarAssoc/dat.snp3
inst/extdata/solarAssoc/snp.genocov1
inst/extdata/solarAssoc/plink
inst/extdata/solarAssoc/plink/dat50.tfam
inst/extdata/solarAssoc/plink/dat50.map
inst/extdata/solarAssoc/plink/dat50.tped
inst/extdata/solarAssoc/plink/dat50.raw
inst/extdata/solarAssoc/plink/dat50.ped
inst/extdata/solarAssoc/dat.snp2
inst/extdata/solarAssoc/snp.genocov3
inst/extdata/solarAssoc/dat.snp1
inst/extdata/solarAssoc/map.snp.1.3
inst/extdata/solarAssoc/dat.snp4
inst/extdata/solarAssoc/map.snp.1.4
inst/extdata/solarAssoc/snp.geno-list2
inst/extdata/solarAssoc/snp.geno-list4
inst/extdata/solarAssoc/map.snp.1.1
inst/extdata/solarAssoc/snp.geno-list3
inst/extdata/solarAssoc/map.snp.1
NAMESPACE
NEWS
data
data/dat50.RData
data/dat30.RData
data/datalist
R
R/transforms.lib.R R/solarMultivar.R R/solarBayesAvg.R R/classSolarPolygenic.R R/solarMultipoint.R R/classSolarAssoc.R R/files.lib.R R/plot.lib.R R/solarAssoc.R R/solarPolygenic.R R/solarPolyAssoc.R R/solarPar.R R/support.lib.R R/solar.lib.R R/package.R R/polygenic.lib.R R/classSolarMultipoint.R R/multipoint.lib.R R/assoc.lib.R R/modelPar.R R/datasets.R R/data.lib.R README.md
MD5
DESCRIPTION
man
man/df2solar.Rd man/readPhen.Rd man/explainedVarProp.Rd man/annotate.Rd man/solarPolygenicClass.Rd man/solarBaeysAvgPolygenicClass.Rd man/solarPolygenic.Rd man/solarReadFiles.Rd man/solarMultivarClass.Rd man/dat30.Rd man/solarAssocClass.Rd man/tabplot.Rd man/availableTransforms.Rd man/plotRes.Rd man/transformTrait.Rd man/snp2solar.Rd man/solar.Rd man/dat50.Rd man/getFormulaStr.Rd man/solarAssoc.Rd man/matchIdNames.Rd man/loadExamplesPhen.Rd man/solarMultipoint.Rd man/modelPar.Rd man/solarKinship2.Rd man/annotateSNPs.Rd man/solarMultipointClass.Rd man/package.file.Rd man/plotKinship2.Rd man/solarPar.Rd man/solarPolyAssoc.Rd man/plotPed.Rd man/transformData.Rd man/loadMulticPhen.Rd man/matchMapNames.Rd man/plotQQManh.Rd
solarius documentation built on May 29, 2017, 3:58 p.m.