Nothing
context("solarAssoc")
# input data
test_that("input data parameters `genocovdata` and `genodata`", {
data(dat50)
snps <- 1:2
mod1 <- solarAssoc(trait ~ 1, phenodata, snpdata = genodata[, snps], kinship = kin)
mod2 <- solarAssoc(trait ~ 1, phenodata, snpcovdata = genocovdata[, snps], kinship = kin)
expect_equal(mod1$snpf$pSNP, mod2$snpf$pSNP)
})
test_that("input data parameters 2 `genocov.files` & 2 `snplists.files`", {
data(dat50)
dir <- system.file("inst/extdata/solarAssoc/", package = "solarius")
genocov.files <- file.path(dir, c("snp.genocov2", "snp.genocov3"))
snplists.files <- file.path(dir, c("snp.geno-list2", "snp.geno-list3"))
mod <- solarAssoc(trait ~ 1, phenodata, genocov.files = genocov.files, snplists.files = snplists.files)
expect_true("solarAssoc" %in% class(mod))
})
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