spBayesSurv: Bayesian Modeling and Analysis of Spatially Correlated Survival Data
Version 1.1.1

Provides several Bayesian survival models for spatial/non-spatial survival data: marginal Bayesian Nonparametric models, marginal Bayesian proportional hazards models, generalized accelerated failure time frailty models, and standard semiparametric frailty models within the context of proportional hazards, proportional odds and accelerated failure time.

Browse man pages Browse package API and functions Browse package files

AuthorHaiming Zhou <zhouh@niu.edu> and Tim Hanson <hansont@stat.sc.edu>
Date of publication2017-05-15 05:25:00 UTC
MaintainerHaiming Zhou <zhouh@niu.edu>
LicenseGPL (>= 2)
Version1.1.1
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("spBayesSurv")

Man pages

anovaDDP: Bayesian Nonparametric Survival Model
baseline: Stratification effects on baseline functions
b_spline: Generate a Cubic B-Spline Basis Matrix
frailtyGAFT: Generalized Accelerated Failure Time Frailty Model
frailtyprior: Frailty prior specification
GetCurves: Density, Survival, and Hazard Estimates
indeptCoxph: Bayesian Proportional Hazards Model
LeukSurv: The Leukemia Survival Data
predict.b_spline: Evaluate a Cubic Spline Basis
spCopulaCoxph: Marginal Bayesian Proportional Hazards Model via Spatial...
spCopulaDDP: Marginal Bayesian Nonparametric Survival Model via Spatial...
SuperSurvRegBayes: Bayesian Semiparametric Super Survival Model
survregbayes: Bayesian Semiparametric Survival Models
survregbayes2: Bayesian Semiparametric Survival Models

Functions

BF.survregbayes Man page
CoxPHplots Source code
DDPplots Source code
DistMat Source code
GetCurves Man page
LeukSurv Man page
SuperSurvRegBayes Man page
anovaDDP Man page
b_spline Man page
baseline Man page Source code
cox.snell.survregbayes Man page
frailtyGAFT Man page
frailtyprior Man page Source code
indeptCoxph Man page
plot.SuperSurvRegBayes Man page
plot.anovaDDP Man page
plot.frailtyGAFT Man page
plot.indeptCoxph Man page
plot.spCopulaCoxph Man page
plot.spCopulaDDP Man page
plot.survregbayes Man page
plot.survregbayes2 Man page
predict.b_spline Man page
print.SuperSurvRegBayes Man page
print.frailtyGAFT Man page
print.indeptCoxph Man page
print.spCopulaCoxph Man page
print.summary.SuperSurvRegBayes Man page
print.summary.frailtyGAFT Man page
print.summary.indeptCoxph Man page
print.summary.spCopulaCoxph Man page
print.summary.survregbayes Man page
print.summary.survregbayes2 Man page
print.survregbayes Man page
print.survregbayes2 Man page
rho_Exp Source code
rho_Gau Source code
rho_pow Source code
spCopulaCoxph Man page
spCopulaDDP Man page
summary.SuperSurvRegBayes Man page
summary.frailtyGAFT Man page
summary.indeptCoxph Man page
summary.spCopulaCoxph Man page
summary.survregbayes Man page
summary.survregbayes2 Man page
survregbayes Man page
survregbayes2 Man page

Files

inst
inst/CITATION
inst/otherdata
inst/otherdata/nwengland.bnd
inst/otherdata/nigeria.bnd
inst/doc
inst/doc/spBayesSurv.pdf
inst/doc/spBayesSurv.Rnw
src
src/spSurv_nonfrailtyLDTFP.cpp
src/spSurv_PO_MPT.cpp
src/Makevars
src/spSurv_PO_BP.cpp
src/spSurv_PH_MPT.cpp
src/spSurv_spatialtools.cpp
src/spSurv_anovaDDP.cpp
src/spSurv_LDTFP_tools.cpp
src/spSurv_MPT_tools_single.h
src/spSurv_common.cpp
src/spSurv_frailty_GRF_LDTFP.cpp
src/spSurv_DDP_tools.h
src/spSurv_spatialtools.h
src/spSurv_common.h
src/spSurv_LDTFP_tools.h
src/spSurv_MPT_tools_super.cpp
src/spSurv_spCopulaCoxph.cpp
src/spSurv_MPT_tools_single.cpp
src/spSurv_AFT_BP.cpp
src/spSurv_DDP_tools.cpp
src/registerDynamicSymbol.c
src/spSurv_frailtyLDTFP.cpp
src/spSurv_MPT_tools_super.h
src/spSurv_BP_tools.h
src/spSurv_PHPOAFT_BP.cpp
src/spSurv_indeptCoxph.cpp
src/spSurv_PH_BP.cpp
src/spSurv_BP_tools.cpp
src/Makevars.win
src/spSurv_Coxph_tools.h
src/spSurv_spCopulaDDP.cpp
src/spSurv_AFT_MPT.cpp
src/spSurv_Coxph_tools.cpp
NAMESPACE
data
data/LeukSurv.rda
R
R/indeptCoxph.R
R/spCopulaDDP.R
R/wrappers.R
R/GetCurves.R
R/spCopulaCoxph.R
R/anovaDDP.R
R/survregbayes.R
R/frailtyGAFT.R
R/survregbayes2.R
R/SuperSurvRegBayes.R
vignettes
vignettes/Leukemia-GAFT-CAR-Map.pdf
vignettes/Leukemia-PO-GRF-Cox-Snell.pdf
vignettes/bibliography.bib
vignettes/Leukemia-PO-GRF-age.pdf
vignettes/spBayesSurv.Rnw
vignettes/Leukemia-PO-CAR-age.pdf
vignettes/Leukemia-PO-CAR-Cox-Snell.pdf
vignettes/Leukemia-PO-GRF-trace.pdf
vignettes/Leukemia-LDDPM-copula-Map.pdf
vignettes/Leukemia-GAFT-CAR-age.pdf
vignettes/Leukemia-LDDPM-copula-age.pdf
vignettes/Leukemia-GAFT-CAR-trace.pdf
vignettes/Leukemia-PO-CAR-Map.pdf
vignettes/Leukemia-PH-copula-trace.pdf
vignettes/Leukemia-PO-GRF-Map.pdf
vignettes/Leukemia-LDDPM-copula-trace.pdf
vignettes/Leukemia-PH-copula-age.pdf
vignettes/Leukemia-PO-CAR-trace.pdf
vignettes/Leukemia-PH-copula-Map.pdf
MD5
build
build/vignette.rds
DESCRIPTION
man
man/b_spline.Rd
man/baseline.Rd
man/survregbayes.Rd
man/anovaDDP.Rd
man/frailtyGAFT.Rd
man/survregbayes2.Rd
man/spCopulaCoxph.Rd
man/spCopulaDDP.Rd
man/GetCurves.Rd
man/LeukSurv.Rd
man/indeptCoxph.Rd
man/frailtyprior.Rd
man/SuperSurvRegBayes.Rd
man/predict.b_spline.Rd
spBayesSurv documentation built on May 19, 2017, 8:01 p.m.