produce_summary_for_all_values_of_parameter: For one parameter, evaluate the results of all values that...

Description Usage Arguments Value

View source: R/robustness_analysis.R

Description

For one parameter, evaluate the results of all values that parameter can take

Usage

1
2
3
4
produce_summary_for_all_values_of_parameter(FILEPATH, param,
  param_val_list, BASELINE, baseline_evaluated, PARAMETERS, EXP_PARAMS,
  NUMRUNSPERSAMPLE, MEASURES, RESULTFILENAME, ALTERNATIVEFILENAME,
  OUTPUTCOLSTART, OUTPUTCOLEND)

Arguments

FILEPATH

Directory where either the simulation runs or single CSV file result can be found

param

Current index of parameter being evaluated

param_val_list

List of values this parameter can take

BASELINE

Array containing the values assigned to each of these parameters in the calibrated baseline

baseline_evaluated

Whether results for the baseline have been calculated

PARAMETERS

Array containing the names of the parameters for which local analyses are being conducted

EXP_PARAMS

Set of the value of all parameters being examined

NUMRUNSPERSAMPLE

The number of runs performed for each parameter subset. This figure is generated through Aleatory Analysis

MEASURES

Array containing the names of the output measures which are used to analyse the simulation

RESULTFILENAME

Name of the simulation results file. In the current version, XML and CSV files can be processed. If performing this analysis over multiple timepoints, it is assumed that the timepoint follows the file name, e.g. trackedCells_Close_12.csv.

ALTERNATIVEFILENAME

In some cases, it may be relevant to read from a further results file if he initial file contains no results. This filename is set here.

OUTPUTCOLSTART

Column number in the simulation results file where output begins - saves (a) reading in unnecessary data, and (b) errors where the first column is a label, and therefore could contain duplicates.

OUTPUTCOLEND

Column number in the simulation results file where the last output measure is. Only required if running the first method.

Value

The results for this parameter, and whether the baseline has been evaluated


spartan documentation built on May 2, 2019, 9:39 a.m.