sim_data_for_emulation: Set of parameter and response pairs for training an emulator...

In spartan: Simulation Parameter Analysis R Toolkit ApplicatioN: 'spartan'

Description

This dataset contains 500 sets of parameter values and the responses that were observed under those conditions when run through the simulator. This is used as a dataset to show how one could use a set of simulation results to train emulators, that in turn could be combined to form an ensemble.

Usage

data(sim_data_for_emulation)

Format

A list with 500 rows (one per parameter set) and nine columns

Details

• stableBindProbability. Parameter values between 0 and 100

• chemokineExpressionThreshold. Parameter values between 0 and 1

• initialChemokineExpressionValue. Parameter values between 0.1 and 0.5

• maxChemokineExpressionValue. Parameter values between 0.015 and 0.08

• maxProbabilityOfAdhesion. Parameter values between 0 and 1

• adhesionFactorExpressionSlope. Parameter values between 0.25 and 5

• Velocity. Simulation response measure for cell speed

• Displacement. Simulation response measure for cell displacement

• PatchArea. Simulation response measure for size of formed clusters

spartan documentation built on May 2, 2019, 9:39 a.m.