pmaxT: Ajusted p-values for step down multiple testing
In sprint: Simple Parallel R INTerface
Description
Usage
Arguments
Author(s)
See Also
Description
Function which implements a parallel version of the multtest "mt.maxT"
function. It computes the adjusted p-values for step-down multiple testing
procedures.
N.B. Please see the SPRINT User Guide for how to run the code in parallel
using the mpiexec command.
Usage
1
2
pmaxT(X, classlabel, test = "t", side = "abs", fixed.seed.sampling = "y",
B = 10000, na = .naNUM, nonpara = "n")
Arguments
X
double precision 2D array of data
classlabel
class column labels of the input data array
test
one of the following statistical test: t. t.equalvar,
Wilcoxon, F, Pair-T, Block-F
side
Type of rejection region, either abs, upper or lower
fixed.seed.sampling
whether the permutations are calculated on the
fly or save to memory
B
number or permutations
na
missing value tag
nonpara
whether non-parametric test statistics or not
Author(s)
University of Edinburgh SPRINT Team
sprint@ed.ac.uk
www.r-sprint.org
See Also
sprint documentation built on May 30, 2017, 8:25 a.m.
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Description Usage Arguments Author(s) See Also
Description
Function which implements a parallel version of the multtest "mt.maxT" function. It computes the adjusted p-values for step-down multiple testing procedures.
N.B. Please see the SPRINT User Guide for how to run the code in parallel using the mpiexec command.
Usage
1 2 | pmaxT(X, classlabel, test = "t", side = "abs", fixed.seed.sampling = "y",
B = 10000, na = .naNUM, nonpara = "n")
|
Arguments
X |
double precision 2D array of data |
classlabel |
class column labels of the input data array |
test |
one of the following statistical test: t. t.equalvar, Wilcoxon, F, Pair-T, Block-F |
side |
Type of rejection region, either abs, upper or lower |
fixed.seed.sampling |
whether the permutations are calculated on the fly or save to memory |
B |
number or permutations |
na |
missing value tag |
nonpara |
whether non-parametric test statistics or not |
Author(s)
University of Edinburgh SPRINT Team sprint@ed.ac.uk www.r-sprint.org
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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