Plot Drop-out Events

Share:

Description

GUI simplifying the creation of plots from dropout data.

Usage

1
2
plotDropout_gui(env = parent.frame(), savegui = NULL, debug = FALSE,
  parent = NULL)

Arguments

env

environment in wich to search for data frames and save result.

savegui

logical indicating if GUI settings should be saved in the environment.

debug

logical indicating printing debug information.

parent

widget to get focus when finished.

Details

Plot dropout data as heatmap arranged by, average peak height, amount, concentration, or sample name. It is also possible to plot the empirical cumulative distribution (ecdp) of the peak heights of surviving heterozygote alleles (with dropout of the parter allele), or a dotplot of all dropout events. The peak height of homozygote alleles can be included in the ecdp. Automatic plot titles can be replaced by custom titles. A name for the result is automatiaclly suggested. The resulting plot can be saved as either a plot object or as an image.

Value

TRUE

See Also

http://docs.ggplot2.org/current/ for details on plot settings.

Want to suggest features or report bugs for rdrr.io? Use the GitHub issue tracker.