sumFREGAT-package: sumFREGAT: Fast REGional Association Tests on summary...
In sumFREGAT: Fast Region-Based Association Tests on Summary Statistics
sumFREGAT-package R Documentation
sumFREGAT: Fast REGional Association Tests on summary statistics
Description
The sumFREGAT package computes the most popular and efficient
tests for the region-based association analysis using summary statistics data
(beta and P values) and correlations between genetic variants. It does not
require genotype or phenotype data. Methods implemented are SKAT and SKAT-O
(sequence kernel association tests), BT (burden test), ACAT (aggregated Cauchy
association test), FLM (functional linear model), PCA (principal components analysis),
and others.
Details
Package: sumFREGAT
Type: Package
License: GPLv3
Author(s)
Nadezhda Belonogova <belon@bionet.nsc.ru>
Gulnara Svishcheva <gulsvi@bionet.nsc.ru>
The authors are grateful to Dr. Anatoly Kirichenko for technical support
and Prof. Tatiana Axenovich for scientific guidance.
sumFREGAT documentation built on June 7, 2022, 9:06 a.m.
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| sumFREGAT-package | R Documentation |
sumFREGAT: Fast REGional Association Tests on summary statistics
Description
The sumFREGAT package computes the most popular and efficient tests for the region-based association analysis using summary statistics data (beta and P values) and correlations between genetic variants. It does not require genotype or phenotype data. Methods implemented are SKAT and SKAT-O (sequence kernel association tests), BT (burden test), ACAT (aggregated Cauchy association test), FLM (functional linear model), PCA (principal components analysis), and others.
Details
Package: sumFREGAT
Type: Package
License: GPLv3
Author(s)
Nadezhda Belonogova <belon@bionet.nsc.ru>
Gulnara Svishcheva <gulsvi@bionet.nsc.ru>
The authors are grateful to Dr. Anatoly Kirichenko for technical support
and Prof. Tatiana Axenovich for scientific guidance.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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