Description Usage Arguments Details Value Author(s) See Also
Computes Sorensen similarity matrix for biclusters in two bicluster sets
1 | sorensenMat(x, y, type=c("rows", "cols", "both"))
|
x |
BiclustSet object containing row and column indicators of bicluster membership, number of biclusters |
y |
BiclustSet object containing row and column indicators of bicluster membership, number of biclusters |
type |
whether to compute Sorensen index in two dimensions, row dimension or column dimension |
This function operates on BiclustSet objects and computes pairwise similarity based on the common elements between biclusters. Sorensen similarity score so for two biclusters A and B is computed as
so = \frac{2|A\cap B|}{|A| + |B|}
matrix of pairwise Sorensen indices
Tatsiana Khamiakova
similarity
,jaccardMat
, ochiaiMat
, sensitivityMat
,
specificityMat
,kulczynskiMat
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.