superpc: Supervised principal components

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Supervised principal components for regression and survival analsysis. Especially useful for high-dimnesional data, including microarray data.

Author
Eric Bair, R. Tibshirani
Date of publication
2012-02-27 07:36:05
Maintainer
Rob Tibshirani <tibs@stanford.edu>
License
GPL-2
Version
1.09
URLs

View on CRAN

Man pages

superpc.cv
Cross-validation for supervised principal components
superpc.decorrelate
Decorrelate features with respect to competing predictors
superpc.fit.to.outcome
Fit predictive model using outcome of supervised principal...
superpc.internal
Internal superpc functions
superpc.listfeatures
Return a list of the important predictors
superpc.lrtest.curv
Compute values of likelihood ratio test from supervised...
superpc.plotcv
Plot output from superpc.cv
superpc.plot.lrtest
Plot likelhiood ratio test statistics
superpc.plotred.lrtest
Plot likelihood ratio test statistics from supervised...
superpc.predict
Form principal components predictor from a trained superpc...
superpc.predictionplot
Plot outcome predictions from superpc
superpc.predict.red
Feature selection for supervised principal components
superpc.predict.red.cv
Cross-validation of feature selection for supervised...
superpc.rainbowplot
Make rainbow plot of superpc and compeiting predictors
superpc.train
Prediction by supervised principal components

Files in this package

superpc
superpc/MD5
superpc/NAMESPACE
superpc/R
superpc/R/superpc.plotcv.R
superpc/R/superpc.predictionplot.R
superpc/R/permute.rows.R
superpc/R/superpc.cv.R
superpc/R/superpc.plotred.lrtest.R
superpc/R/superpc.train.R
superpc/R/superpc.predict.red.cv.R
superpc/R/superpc.plot.lrtest.R
superpc/R/superpc.lrtest.curv.R
superpc/R/superpc.morefuns.R
superpc/R/superpc.fit.to.outcome.R
superpc/R/superpc.listfeatures.R
superpc/R/oldsuperpc.predict.red.cv.R
superpc/R/superpc.xlfuns.R
superpc/R/balanced.folds.R
superpc/R/superpc.decorrelate.R
superpc/R/superpc.rainbowplot.R
superpc/R/superpc.predict.R
superpc/R/superpc.predict.red.R
superpc/man
superpc/man/superpc.internal.Rd
superpc/man/superpc.predict.red.cv.Rd
superpc/man/superpc.predict.Rd
superpc/man/superpc.predictionplot.Rd
superpc/man/superpc.plotred.lrtest.Rd
superpc/man/superpc.rainbowplot.Rd
superpc/man/superpc.lrtest.curv.Rd
superpc/man/superpc.listfeatures.Rd
superpc/man/superpc.fit.to.outcome.Rd
superpc/man/superpc.plot.lrtest.Rd
superpc/man/superpc.plotcv.Rd
superpc/man/superpc.train.Rd
superpc/man/superpc.predict.red.Rd
superpc/man/superpc.decorrelate.Rd
superpc/man/superpc.cv.Rd
superpc/DESCRIPTION