sybilcycleFreeFlux: Cycle-Free Flux Balance Analysis (CycleFreeFlux)

Implement cycle-Free flux balance analysis (CycleFreeFlux), cycle-free flux variability, and Random Sampling of solution space. Desouki, A. A., Jarre, F., Gelius-Dietrich, G., & Lercher, M. J. (2015). CycleFreeFlux: efficient removal of thermodynamically infeasible loops from flux distributions. Bioinformatics, 31(13), 2159-2165. <doi.org/10.1093/bioinformatics/btv096>. Flux balance analysis is a technique to find fluxes in metabolic models at steady state. It is described in Orth, J.D., Thiele, I. and Palsson, B.O. What is flux balance analysis? Nat. Biotech. 28, 245-248 (2010).

Package details

AuthorAbdelmoneim Amer Desouki [aut, cre]
MaintainerAbdelmoneim Amer Desouki <[email protected]>
LicenseGPL-3
Version2.0.1
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("sybilcycleFreeFlux")

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sybilcycleFreeFlux documentation built on Dec. 16, 2019, 1:19 a.m.