parse_: Parse bibliographic text in a variety of formats

In synthesisr: Import, Assemble, and Deduplicate Bibliographic Datasets

Description

Text in standard formats - such as imported via readLines - can be parsed using a variety of standard formats. Use detect_parser to determine which is the most appropriate parser for your situation.

Usage

parse_pubmed(x)

parse_ris(x, tag_naming = "best_guess")

parse_bibtex(x)

parse_csv(x)

parse_tsv(x)

Arguments

x	A character vector containing bibliographic information in ris format.
tag_naming	What format are ris tags in? Defaults to "best_guess" See read_refs for a list of accepted arguments.

Value

Returns an object of class bibliography (ris, bib, or pubmed formats) or data.frame (csv or tsv).

Examples

eviatlas <- c(
  "TY  - JOUR",
  "AU  - Haddaway, Neal R.",
  "AU  - Feierman, Andrew",
  "AU  - Grainger, Matthew J.",
  "AU  - Gray, Charles T.",
  "AU  - Tanriver-Ayder, Ezgi",
  "AU  - Dhaubanjar, Sanita",
  "AU  - Westgate, Martin J.",
  "PY  - 2019",
  "DA  - 2019/06/04",
  "TI  - EviAtlas: a tool for visualising evidence synthesis databases",
  "JO  - Environmental Evidence",
  "SP  - 22",
  "VL  - 8",
  "IS  - 1",
  "SN  - 2047-2382",
  "UR  - https://doi.org/10.1186/s13750-019-0167-1",
  "DO  - 10.1186/s13750-019-0167-1",
  "ID  - Haddaway2019",
  "ER  - "
)

detect_parser(eviatlas) # = "parse_ris"
df <- as.data.frame(parse_ris(eviatlas))
ris_out <- write_refs(df, format = "ris", file = FALSE)

synthesisr documentation built on July 2, 2020, 2:16 a.m.