API for taxa
Taxonomic Classes

Global functions
\%>\% Man page
add_names Source code
all_functions Man page Source code
all_names Man page Source code
all_names.Taxonomy Source code
all_names.default Source code
arrange_obs Man page Source code
arrange_obs.Taxmap Source code
arrange_obs.default Source code
arrange_taxa Man page Source code
arrange_taxa.Taxonomy Source code
arrange_taxa.default Source code
assert Source code
check_for_pkg Man page Source code
check_taxmap_data Man page Source code
contains Man page
convert_base Man page Source code
count_capture_groups Man page Source code
csep2vec Source code
ct Source code
data_used Man page Source code
data_used.Taxonomy Source code
data_used.default Source code
database_list Man page
ends_with Man page
everything Man page
ex_hierarchies Man page
ex_hierarchy1 Man page
ex_hierarchy2 Man page
ex_hierarchy3 Man page
ex_taxmap Man page
ex_taxonomy Man page
extract_tax_data Man page Source code
filter_obs Man page Source code
filter_obs.Taxmap Source code
filter_obs.default Source code
filter_taxa Man page Source code
filter_taxa.Taxonomy Source code
filter_taxa.default Source code
filtering-helpers Man page
format_taxon_subset Man page Source code
get_data Man page Source code
get_data.Taxonomy Source code
get_data.default Source code
get_database_name Man page Source code
get_dots_or_list Man page Source code
get_sort_var Man page Source code
helpers_fxn_se Source code
hierarchies Man page Source code
hierarchy Man page Source code
id_classifications Man page Source code
id_classifications.Taxonomy Source code
id_classifications.default Source code
ids Man page Source code
is_branch Man page Source code
is_branch.Taxonomy Source code
is_branch.default Source code
is_leaf Man page Source code
is_leaf.Taxonomy Source code
is_leaf.default Source code
is_root Man page Source code
is_root.Taxonomy Source code
is_root.default Source code
is_stem Man page Source code
is_stem.Taxonomy Source code
is_stem.default Source code
leaves Man page Source code
leaves.Taxonomy Source code
leaves.default Source code
limited_print Man page Source code
lookup_tax_data Man page Source code
map_data Man page Source code
map_data.Taxonomy Source code
map_data.default Source code
map_unique Man page Source code
matches Man page
multi_sep_split Man page Source code
mutate_obs Man page Source code
mutate_obs.Taxmap Source code
mutate_obs.default Source code
n_obs Man page Source code
n_obs.Taxmap Source code
n_obs.default Source code
n_obs_1 Man page Source code
n_obs_1.Taxmap Source code
n_obs_1.default Source code
n_subtaxa Man page Source code
n_subtaxa.Taxonomy Source code
n_subtaxa.default Source code
n_subtaxa_1 Man page Source code
n_subtaxa_1.Taxonomy Source code
n_subtaxa_1.default Source code
n_supertaxa Man page Source code
n_supertaxa.Taxonomy Source code
n_supertaxa.default Source code
name_classifications Man page Source code
name_classifications.Taxonomy Source code
name_classifications.default Source code
names_used Man page Source code
names_used.Taxonomy Source code
names_used.default Source code
nms Man page Source code
num_range Man page
obs Man page Source code
obs.Taxmap Source code
obs.default Source code
obs_apply Man page Source code
obs_apply.Taxmap Source code
obs_apply.default Source code
one_of Man page
parse_heirarchies_to_taxonomy Source code
parse_possibly_named_logical Man page Source code
parse_tax_data Man page Source code
pick Man page Source code
pick.Hierarchy Source code
pick.default Source code
pick.hierarchies Source code
pop Man page Source code
pop.Hierarchy Source code
pop.default Source code
pop.hierarchies Source code
print.hierarchies Source code
print.taxa Source code
print.taxapicker Source code
print_item Man page Source code
ranks Man page Source code
ranks_ref Man page
replace_taxon_ids Man page Source code
replace_taxon_ids.Taxonomy Source code
replace_taxon_ids.default Source code
roots Man page Source code
roots.Taxonomy Source code
roots.default Source code
sample_frac_obs Man page Source code
sample_frac_obs.Taxmap Source code
sample_frac_obs.default Source code
sample_frac_taxa Man page Source code
sample_frac_taxa.Taxonomy Source code
sample_frac_taxa.default Source code
sample_n_obs Man page Source code
sample_n_obs.Taxmap Source code
sample_n_obs.default Source code
sample_n_taxa Man page Source code
sample_n_taxa.Taxonomy Source code
sample_n_taxa.default Source code
select_obs Man page Source code
select_obs.Taxmap Source code
select_obs.default Source code
span Man page Source code
span.Hierarchy Source code
span.default Source code
span.hierarchies Source code
starts_with Man page
stems Man page Source code
stems.Taxonomy Source code
stems.default Source code
strex Source code
subtaxa Man page Source code
subtaxa.Taxonomy Source code
subtaxa.default Source code
subtaxa_apply Man page Source code
subtaxa_apply.Taxonomy Source code
subtaxa_apply.default Source code
supertaxa Man page Source code
supertaxa.Taxonomy Source code
supertaxa.default Source code
supertaxa_apply Man page Source code
supertaxa_apply.Taxonomy Source code
supertaxa_apply.default Source code
taxa Man page Source code
taxa-package Man page
taxmap Man page Source code
taxon Man page Source code
taxon_database Man page Source code
taxon_id Man page Source code
taxon_ids Man page Source code
taxon_ids.Taxonomy Source code
taxon_ids.default Source code
taxon_indexes Man page Source code
taxon_indexes.Taxonomy Source code
taxon_indexes.default Source code
taxon_name Man page Source code
taxon_names Man page Source code
taxon_names.Taxonomy Source code
taxon_names.default Source code
taxon_rank Man page Source code
taxon_ranks Man page Source code
taxon_ranks.Taxonomy Source code
taxon_ranks.default Source code
taxonomy Man page Source code
transmute_obs Man page Source code
transmute_obs.Taxmap Source code
transmute_obs.default Source code
unique_mapping Man page Source code
validate_regex_key_pair Man page Source code
validate_regex_match Man page Source code
validate_taxmap_data Man page Source code
validate_taxmap_funcs Man page Source code
which_ranks Source code
taxa documentation built on July 17, 2017, 1:03 a.m.