tests/testthat/_snaps/test_proportion_diff.md

In tern: Create Common TLGs Used in Clinical Trials

prop_chisq returns right result

Code
  res
Output
  [1] 0.05653028

prop_cmh returns right result

Code
  res
Output
  [1] 0.6477165

prop_cmh also works when there are strata with just one observation

Code
  res
Output
  [1] 0.3325724

prop_fisher returns right result

Code
  res
Output
  [1] 0.1109695

prop_schouten returns right result

Code
  res
Output
    [1] 5.551115e-16 2.664535e-15 2.388967e-05 5.496444e-01 7.034548e-01
    [6] 1.528589e-02 6.524537e-06 3.273227e-02 5.066009e-04 0.000000e+00
   [11] 7.430342e-01 3.570927e-02 1.110223e-16 1.456706e-07 5.529267e-01
   [16] 5.027609e-02 3.260725e-13 0.000000e+00 1.481596e-01 7.243689e-01
   [21] 0.000000e+00 1.240955e-07 1.151700e-04 1.371002e-01 6.621880e-02
   [26] 1.032789e-01 2.491135e-04 1.401064e-08 8.069295e-10 3.838188e-01
   [31] 2.100092e-04 2.897827e-08 3.391773e-01 8.044239e-05 7.426580e-02
   [36] 6.502371e-06 1.735152e-06 7.972925e-07 6.737793e-01 7.559297e-01
   [41] 1.343370e-14 4.699432e-07 9.127204e-05 4.510681e-11 1.957185e-01
   [46] 1.994881e-01 5.772153e-03 5.600847e-02 2.910405e-01 3.223508e-01
   [51] 4.809361e-02 9.683365e-13 6.568565e-02 5.456156e-01 6.423022e-01
   [56] 2.369506e-02 1.508898e-05 1.015739e-06 1.160665e-02 9.735705e-01
   [61] 3.316501e-01 9.246754e-02           NA 2.662878e-01 4.718556e-02
   [66] 3.963034e-05 6.313901e-10 1.034728e-13 9.160885e-03 1.772388e-01
   [71] 3.102986e-03 9.381853e-04 1.313180e-03 3.275858e-01 1.691572e-01
   [76] 3.690328e-01 1.734528e-05 7.046586e-13 9.068436e-01 1.379968e-02
   [81] 3.203479e-04 3.722763e-07 1.318029e-02 0.000000e+00 9.758038e-01
   [86] 8.383837e-07 5.848356e-05 8.842058e-09 1.060928e-01 1.318974e-02
   [91] 4.432164e-01 5.103689e-06 4.082526e-04 5.098830e-02 1.118992e-03
   [96] 2.442491e-15 1.476617e-08 5.641109e-01 5.317809e-03 2.889880e-04

s_test_proportion_diff and d_test_proportion_diff return right result

Code
  res
Output
  $d
  [1] "p-value (Cochran-Mantel-Haenszel Test)"

  $s
  $s$pval
  [1] 0.6477165
  attr(,"label")
  [1] "p-value (Cochran-Mantel-Haenszel Test)"

test_proportion_diff returns right result

Code
  res
Output
                                             B     A   
  —————————————————————————————————————————————————————
    p-value (Cochran-Mantel-Haenszel Test)       0.6477

test_proportion_diff edge case: all responder by chisq

Code
  res
Output
                                 B     A   
  —————————————————————————————————————————
    p-value (Chi-Squared Test)       1.0000

test_proportion_diff edge case: all responder by schouten

Code
  res
Output
                                                          B     A   
  ——————————————————————————————————————————————————————————————————
    p-value (Chi-Squared Test with Schouten Correction)       1.0000

test_proportion_diff edge case: all responder by fisher

Code
  res
Output
                                      B     A   
  ——————————————————————————————————————————————
  Variable Label                                
      p-value (Fisher's Exact Test)       1.0000

test_proportion_diff edge case: all responder by CMH

Code
  res
Output
                                               B   A 
  ———————————————————————————————————————————————————
  Variable Label                                     
      p-value (Cochran-Mantel-Haenszel Test)       NA

tern documentation built on Sept. 24, 2024, 9:06 a.m.