h_g_ipp: Helper function to create simple line plot over time

In tern: Create Common TLGs Used in Clinical Trials

Helper function to create simple line plot over time

Description

Function that generates a simple line plot displaying parameter trends over time.

Usage

h_g_ipp(
  df,
  xvar,
  yvar,
  xlab,
  ylab,
  id_var,
  title = "Individual Patient Plots",
  subtitle = "",
  caption = NULL,
  add_baseline_hline = FALSE,
  yvar_baseline = "BASE",
  ggtheme = nestcolor::theme_nest(),
  col = NULL
)

Arguments

df	(data.frame) data set containing all analysis variables.
xvar	(string) time point variable to be plotted on x-axis.
yvar	(string) continuous analysis variable to be plotted on y-axis.
xlab	(string) plot label for x-axis.
ylab	(string) plot label for y-axis.
id_var	(string) variable used as patient identifier.
title	(string) title for plot.
subtitle	(string) subtitle for plot.
caption	(string) optional caption below the plot.
add_baseline_hline	(flag) adds horizontal line at baseline y-value on plot when TRUE.
yvar_baseline	(string) variable with baseline values only. Ignored when add_baseline_hline is FALSE.
ggtheme	(theme) optional graphical theme function as provided by ggplot2 to control outlook of plot. Use ggplot2::theme() to tweak the display.
col	(character) line colors.

Value

A ggplot line plot.

See Also

g_ipp() which uses this function.

Examples

library(dplyr)
library(nestcolor)

# Select a small sample of data to plot.
adlb <- tern_ex_adlb %>%
  filter(PARAMCD == "ALT", !(AVISIT %in% c("SCREENING", "BASELINE"))) %>%
  slice(1:36)

p <- h_g_ipp(
  df = adlb,
  xvar = "AVISIT",
  yvar = "AVAL",
  xlab = "Visit",
  id_var = "USUBJID",
  ylab = "SGOT/ALT (U/L)",
  add_baseline_hline = TRUE
)
p

tern documentation built on Sept. 24, 2024, 9:06 a.m.