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The 'ESTIMATE' package infers tumor purity from expression data as a function of immune and stromal infiltrate, but requires writing of intermediate files, is unpipeable, and performs poorly when presented with modern datasets with current gene symbols. 'tidyestimate' a fast, tidy, modern reimagination of 'ESTIMATE' (2013) <doi:10.1038/ncomms3612>.
Package details 


Author  Kai Aragaki [aut, cre] (<https://orcid.org/0000000294580426>), Paul Roebuck [cph] (Copyright holder of ESTIMATE package), Kosuke Yoshihara [aut] (Author of original ESTIMATE algorithm), Rahulsimham Vegesna [aut] (Author of original ESTIMATE algorithm), Hoon Kim [aut] (Author of original ESTIMATE algorithm), Roel Verhaak [aut] (Author of original ESTIMATE algorithm) 
Maintainer  Kai Aragaki <aaragak1@jhmi.edu> 
License  GPL (>= 2) 
Version  1.1.0 
URL  https://github.com/KaiAragaki/tidyestimate 
Package repository  View on CRAN 
Installation 
Install the latest version of this package by entering the following in R:

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