Description Usage Format Source

A data frame containing the ABSOLUTE-measured and ESTIMATE-predicted purity values of 995 tumors. Additionally, stromal and immune scores as calculated by ESTIMATE. All tumors were profiled on Affymetrix arrays, and were used to generate the Affymetrix algorithm.

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A data frame with 995 rows and 7 variables:

- purity_observed
The purity of a tumor given by ABSOLUTE, ranging from 0 (least pure) to 1 (most pure)

- stromal
Stromal infiltration score, as measured by ESTIMATE

- immune
Immune infiltration score, as measured by ESTIMATE

- estimate
ESTIMATE score, calculated by the sum of immune and stromal scores

- purity_predicted
Tumor purity inferred using the ESTIMATE algorithm

- ci_95_low
Lower bound of a 95% confidence interval of predicted purity scores

- ci_95_high
Upper bound of a 95% confidence interval of predicted purity scores

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