new_aesthetic_config: Plot Aesthetic Configuration Class

In topolow: Force-Directed Euclidean Embedding of Dissimilarity Data

Plot Aesthetic Configuration Class

Description

S3 class for configuring plot visual aesthetics including points, colors, labels and text elements.

Usage

new_aesthetic_config(
  point_size = 3.5,
  point_alpha = 0.8,
  point_shapes = c(antigen = 16, antiserum = 0),
  color_palette = c25,
  gradient_colors = list(low = "blue", high = "red"),
  show_labels = FALSE,
  show_title = FALSE,
  label_size = 3,
  title_size = 14,
  subtitle_size = 12,
  axis_title_size = 12,
  axis_text_size = 10,
  legend_text_size = 10,
  legend_title_size = 12,
  show_legend = TRUE,
  legend_position = "right",
  arrow_head_size = 0.2,
  arrow_alpha = 0.6
)

Arguments

point_size	Base point size
point_alpha	Point transparency
point_shapes	Named vector of shapes for different point types
color_palette	Color palette name or custom palette
gradient_colors	List with low and high colors for gradients
show_labels	Whether to show point labels
show_title	Whether to show plot title (default: FALSE)
label_size	Label text size
title_size	Title text size
subtitle_size	Subtitle text size
axis_title_size	Axis title text size
axis_text_size	Axis text size
legend_text_size	Legend text size
legend_title_size	Legend title text size
show_legend	Whether to show the legend
legend_position	Legend position ("none", "right", "left", "top", "bottom")
arrow_head_size	Size of the arrow head for velocity arrows (in cm)
arrow_alpha	Transparency of arrows (0 = invisible, 1 = fully opaque)

Value

An S3 object of class aesthetic_config, which is a list containing the specified configuration parameters for plot aesthetics.

topolow documentation built on Aug. 31, 2025, 1:07 a.m.