new_annotation_config: Visualization functions for the topolow package Plot...

In topolow: Force-Directed Euclidean Embedding of Dissimilarity Data

Visualization functions for the topolow package Plot Annotation Configuration Class

Description

S3 class for configuring point annotations in plots, including labels, connecting lines, and visual properties.

Usage

new_annotation_config(
  notable_points = NULL,
  size = 4.9,
  color = "black",
  alpha = 0.9,
  fontface = "plain",
  box = FALSE,
  segment_size = 0.3,
  segment_alpha = 0.6,
  min_segment_length = 0,
  max_overlaps = Inf,
  outline_size = 0.4
)

Arguments

notable_points	Character vector of notable points to highlight
size	Numeric. Size of annotations for notable points
color	Character. Color of annotations for notable points
alpha	Numeric. Alpha transparency of annotations
fontface	Character. Font face of annotations ("plain", "bold", "italic", etc.)
box	Logical. Whether to draw a box around annotations
segment_size	Numeric. Size of segments connecting annotations to points
segment_alpha	Numeric. Alpha transparency of connecting segments
min_segment_length	Numeric. Minimum length of connecting segments
max_overlaps	Numeric. Maximum number of overlaps allowed for annotations
outline_size	Numeric. Size of the outline for annotations

Value

An S3 object of class annotation_config, which is a list containing the specified configuration parameters for plot annotations.

topolow documentation built on Aug. 31, 2025, 1:07 a.m.