tractor.base: Read, Manipulate and Visualise Magnetic Resonance Images

Functions for working with magnetic resonance images. Analyze, NIfTI-1, NIfTI-2 and MGH format images can be read and written; DICOM files can only be read.

AuthorJon Clayden
Date of publication2016-11-07 21:07:48
MaintainerJon Clayden <code@clayden.org>
LicenseGPL-2
Version3.0.7
http://www.tractor-mri.org.uk

View on CRAN

Man pages

allEqual: Test whether all elements of a vector are equal

asMriImage: Creating MriImage objects from data

colourScales: Functions for working with colour scales or palettes

deduplicate: Concatenate and deduplicate vectors

DicomMetadata-class: The DicomMetadata class

emptyMatrix: The empty matrix

equivalent: Test two numeric vectors for equivalence

execute: Find or run an external executable file

files: Working with MRI images stored in NIfTI, Analyze and MGH...

implode: Create a character string by concatenating the elements of a...

index: Indexing methods

mergeMriImages: Merging MriImage objects

MriImage-class: The MriImage class

neighbourhoodInfo: Image neighbourhoods

newSparseArrayWithData: Create a SparseArray object

nilObject: The nil object

paths: Functions for file name and path manipulation

pluralise: Number agreement with a vector

printLabelledValues: Pretty print labelled information

promote: Promote a vector to a single-column or single-row matrix

readDicomDirectory: Read a directory of DICOM files

readDicomFile: Read a DICOM file into a DicomMetadata object

SerialisableObject-class: The SerialisableObject class

serialisation: Reference object serialisation and deserialisation

sortDicomDirectories: Sort a directory of DICOM files into series

SparseArray-class: The SparseArray class

threadSafeTempFile: Obtain thread-safe temporary file names

tractor.base-deprecated: Deprecated functions

vector: Miscellaneous vector functions

viewer: A simple interactive viewer for MriImage objects

visualisation: Visualise MriImage objects

Files in this package

tractor.base
tractor.base/inst
tractor.base/inst/CITATION
tractor.base/NAMESPACE
tractor.base/R
tractor.base/R/mgh.R tractor.base/R/nifti.R tractor.base/R/10_mri_image.R tractor.base/R/15_dicom.R tractor.base/R/files.R
tractor.base/R/sysdata.rda
tractor.base/R/analyze.R tractor.base/R/dicom_dir.R tractor.base/R/internal.R tractor.base/R/deprecated.R tractor.base/R/05_serialise.R tractor.base/R/viz.R tractor.base/R/neighbourhood.R tractor.base/R/vector.R tractor.base/R/xform.R tractor.base/R/00_constants.R tractor.base/R/misc.R tractor.base/R/08_sparse.R tractor.base/R/png.R tractor.base/R/zzz.R tractor.base/R/viewer.R
tractor.base/MD5
tractor.base/DESCRIPTION
tractor.base/man
tractor.base/man/serialisation.Rd tractor.base/man/emptyMatrix.Rd tractor.base/man/paths.Rd tractor.base/man/SparseArray-class.Rd tractor.base/man/execute.Rd tractor.base/man/MriImage-class.Rd tractor.base/man/nilObject.Rd tractor.base/man/deduplicate.Rd tractor.base/man/readDicomFile.Rd tractor.base/man/visualisation.Rd tractor.base/man/DicomMetadata-class.Rd tractor.base/man/files.Rd tractor.base/man/pluralise.Rd tractor.base/man/index.Rd tractor.base/man/printLabelledValues.Rd tractor.base/man/newSparseArrayWithData.Rd tractor.base/man/mergeMriImages.Rd tractor.base/man/viewer.Rd tractor.base/man/sortDicomDirectories.Rd tractor.base/man/colourScales.Rd tractor.base/man/readDicomDirectory.Rd tractor.base/man/implode.Rd tractor.base/man/promote.Rd tractor.base/man/allEqual.Rd tractor.base/man/neighbourhoodInfo.Rd tractor.base/man/threadSafeTempFile.Rd tractor.base/man/equivalent.Rd tractor.base/man/vector.Rd tractor.base/man/tractor.base-deprecated.Rd tractor.base/man/SerialisableObject-class.Rd tractor.base/man/asMriImage.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

All documentation is copyright its authors; we didn't write any of that.