Retrieve gene sequences from NCBI by accession number.
(character) GenBank ids to search for. One or more. Required.
(character) Return type, e.g.,
If bad ids are included with good ones, the bad ones are silently dropped. If all ids are bad you'll get a stop with error message.
data.frame of the form:
taxon - taxonomic name (may include some junk, but hard to parse off)
taxonomy - organism lineage
gene_desc - gene description
organelle - if mitochondrial or chloroplast
gi_no - GI number
acc_no - accession number
keyword - if official DNA barcode
specimen_voucher - museum/lab accession number of vouchered material
lat_lon - longitude/latitude of specimen collection event
country - country/location of specimen collection event
paper_title - title of study
journal - journal study published in (if published)
first_author - first author of study
uploaded_date - date sequence was uploaded to GenBank
length - sequence length
sequence - sequence character string
Scott Chamberlain, Rupert Collins
1 2 3 4 5 6 7 8
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.