umxSummaryCP: Present the results of a Common-pathway twin model in table...

In umx: Structural Equation Modeling and Twin Modeling in R

Present the results of a Common-pathway twin model in table and graphical form

Description

Summarizes a Common-Pathway model, as returned by umxCP()

Usage

umxSummaryCP(
  model,
  digits = 2,
  std = TRUE,
  CIs = FALSE,
  showRg = FALSE,
  comparison = NULL,
  report = c("markdown", "html"),
  file = getOption("umx_auto_plot"),
  returnStd = FALSE,
  ...
)

Arguments

model	A fitted umxCP() model to summarize
digits	Round to how many digits (default = 2)
std	Whether to show the standardized model (TRUE) (ignored: used extended = TRUE to get unstandardized)
CIs	Confidence intervals (default FALSE)
showRg	Whether to show the genetic correlations (default FALSE)
comparison	Run mxCompare on a comparison model (default NULL)
report	Print tables to the console (as 'markdown'), or open in browser ('html')
file	The name of the dot file to write: NA = none; "name" = use the name of the model
returnStd	Whether to return the standardized form of the model (default = FALSE)
...	Optional additional parameters

Value

• optional mxModel()

References

• https://github.com/tbates/umx, https://tbates.github.io

See Also

• umxCP(), plot(), umxSummary() work for IP, CP, GxE, SAT, and ACE models.

Other Summary functions: umxSummary.MxModel(), umxSummaryACEcov(), umxSummaryGxE(), umxSummaryIP(), umxSummaryMRDoC()

Examples

## Not run: 
require(umx)
data(twinData)

twinData$wt1 = twinData$wt1/10
twinData$wt2 = twinData$wt2/10
selDVs = c("ht", "wt")
mzData = subset(twinData, zygosity == "MZFF")
dzData = subset(twinData, zygosity == "DZFF")

m1 = umxCP(selDVs = selDVs, dzData = dzData, mzData = mzData, sep = "", optimizer = "SLSQP")
umxSummaryCP(m1, file = NA) # Suppress plot creation with file
umxSummary(m1, file = NA)   # Generic summary is the same
stdFit = umxSummaryCP(m1, digits = 2, std = TRUE, file = NA, returnStd = TRUE);

umxSummary(m1, std = FALSE, showRg = TRUE, file = NA);
umxSummary(m1, std = FALSE, file = NA)

# =================
# = Print example =
# =================
umxSummary(m1, file = "Figure 3", std = TRUE)

# =================
# = Confint example =
# =================
m1 = umxConfint(m1, "smart", run = FALSE);
m1 = umxConfint(m1, "smart", run = TRUE);
umxSummary(m1, CIs = TRUE, file = NA);

## End(Not run)

umx documentation built on May 29, 2024, 5:40 a.m.