varian: Variability Analysis in R
Version 0.2.2

Uses a Bayesian model to estimate the variability in a repeated measure outcome and use that as an outcome or a predictor in a second stage model.

Browse man pages Browse package API and functions Browse package files

AuthorJoshua F. Wiley [aut, cre], Elkhart Group Limited [cph]
Date of publication2016-02-28 12:57:15
MaintainerJoshua F. Wiley <josh@elkhartgroup.com>
LicenseMIT + file LICENSE
Version0.2.2
URL https://github.com/ElkhartGroup/varian
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("varian")

Man pages

empirical_pvalue: Calculates an empirical p-value based on the data
gamma_params: Estimate the parameters for a Gamma distribution
parallel_stan: Wrapper for the stan function to parallelize chains
param_summary: Calculates summaries for a parameter
pval_smartformat: nice formatting for p-values
res_gamma: Estimates the parameters of a Gamma distribution from SDs
simulate_gvm: Simulate a Gamma Variability Model
stan_inits: Calculate Initial Values for Stan VM Model
varian: Variablity Analysis using a Bayesian Variability Model (VM)
VarMeasures: Variability Measures
vm_diagnostics: Plot diagnostics from a VM model
vmp_plot: Plot the posterior distributions of the focal parameters from...
vm_stan: Create a Stan class VM object

Functions

Variability_Measures Man page
by_id Man page Source code
empirical_pvalue Man page Source code
gamma_params Man page Source code
parallel_stan Man page Source code
param_summary Man page Source code
pval_smartformat Man page Source code
res_gamma Man page Source code
rmssd Man page Source code
rmssd_id Man page Source code
rolling_diff Man page Source code
rolling_diff_id Man page Source code
sd_id Man page Source code
simulate_gvm Man page Source code
stan_inits Man page Source code
varian Man page Source code
varian-package Man page
vm_diagnostics Man page Source code
vm_stan Man page Source code
vmp_plot Man page Source code

Files

tests
tests/testthat.R
tests/testthat
tests/testthat/test-graphing.R
tests/testthat/test-helpers.R
NAMESPACE
R
R/helpers.R
R/diagnostics.R
R/varian.R
R/modeler.R
README.md
MD5
DESCRIPTION
man
man/stan_inits.Rd
man/vm_diagnostics.Rd
man/empirical_pvalue.Rd
man/VarMeasures.Rd
man/simulate_gvm.Rd
man/vmp_plot.Rd
man/vm_stan.Rd
man/param_summary.Rd
man/pval_smartformat.Rd
man/res_gamma.Rd
man/varian.Rd
man/parallel_stan.Rd
man/gamma_params.Rd
LICENSE
varian documentation built on May 19, 2017, 5:38 p.m.