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Penalized Variance Components Analysis

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kernel_linear: Variance Component Linear Kernel Matrix

kernel_linear: Variance Component Linear Kernel Matrix
In vcpen: Penalized Variance Components Analysis

Description Usage Arguments Value Author(s) See Also Examples

View source: R/kernel_linear.R

Description

Variance component Linear kernel matrix from genotype dosage

Usage

1
kernel_linear(dose, method = "linear")

Arguments

dose

data.frame or matrix with

method

type of kernel; currently only linear kernel implemented

Value

square symmetric kernel matrix for subject similarity by genotype dosage

Author(s)

JP Sinnwell, DJ Schaid

See Also

vcpen

Examples

1
2
3
data(vcexample)
Kern1 <- kernel_linear(dose[,which(doseinfo[,1]==1)], method="linear")
Kern1[1:5,1:5]

vcpen documentation built on Jan. 3, 2022, 5:12 p.m.

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README.md Penalized Variance Components

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