vmsbase: GUI Tools to Process, Analyze and Plot Fisheries Data

The tools you need to process, analyze, combine, integrate and plot your fishery data: the georeferenced dataset from the Vessel Monitoring System (VMS), from the Automatic Information System (AIS) or other tracking devices, as well as the catches or landings dataset from the Logbook or Vessel Register. Package 'vmsbase' is equipped by Viewer Tools to visually inspect data at different steps of the analyses and to produce effective outputs for reports and scientific publications. Viewers are conceived to show the VMS pings, to visualize single or multiple tracks for fishing vessels, or to represent the VMS data on Google Viewer, so that the user can produce easy to interpret and more realistic visualization of both fishing effort and effort behaviour. Package 'vmsbase' represents the implementation of several R routines which have been developed by the "Tor Vergata" University of Rome Team involved in the Italian National Program for the Data Collection Framework for Fisheries Data between 2009-2012.

Install the latest version of this package by entering the following in R:
install.packages("vmsbase")
AuthorLorenzo D'Andrea, Tommaso Russo, Antonio Parisi, Stefano Cataudella
Date of publication2016-06-29 02:51:53
MaintainerLorenzo D'Andrea <support@vmsbase.org>
LicenseGPL (>= 2)
Version2.1.3
http://www.vmsbase.org/

View on CRAN

Man pages

Assign_Area: Assign Area - Internal Function

bathymetry: Bathymetry rData File class

CountMap: Effort Count - Internal Function

gui_dcf_ind: DCF indicators GUI

gui_join_lb_vms: VMS-LB Match GUI

gui_lb_db_create: LogBook DataBase Creation GUI

gui_lb_db_edit: Logbook Editing GUI

gui_lb_db_stat: LogBook DB Status GUI

gui_lb_editraw: Raw LogBook Editing GUI

gui_lb_met_cla: LogBook Metier Classification GUI

gui_lb_met_dis: LogBook Metier Discovery GUI

gui_lb_met_edi: Metier Editing GUI

gui_main: VMSbase main GUI

gui_mark_fis_poi: Mark Fishing Points GUI

gui_out_grid: VMS Effort Gridding GUI

gui_vms_db_are: VMS DB Area Assignment GUI

gui_vms_db_clean: VMS DB Clean GUI The 'gui_vms_db_clean' function implements...

gui_vms_db_create: VMS DataBase Creation GUI

gui_vms_db_cut: VMS DB Cut GUI The 'gui_vms_db_cut' function implements the...

gui_vms_db_dep: VMS DB Depth Assignment GUI The 'gui_vms_db_dep' function...

gui_vms_db_intr: VMS DB Interpolation GUI The 'gui_vms_db_intr' function...

gui_vmsdb_mixsou: VMS DataBase Creation GUI

gui_vms_db_sel: VMS DataBase Select GUI The 'gui_vms_db_sel' function...

gui_vms_db_stat: VMS DataBase Status GUI The 'gui_vms_db_stat' function...

gui_vms_editraw: Raw VMS Editing GUI

gui_vms_met_pred: Predict Metier GUI The 'gui_vms_met_pred' function implements...

gui_vms_save_bat: VMS DB Save Bathymetry GUI The 'gui_vms_save_bat' function...

gui_vms_view_intrp: VMS DB View Interpolated Data GUI The 'gui_vms_view_intrp'...

gui_vms_view_ping: VMS DB View Raw Ping Data GUI The 'gui_vms_view_ping'...

gui_vms_view_track: VMS DB View Track Data GUI The 'gui_vms_view_track' function...

gui_vms_viz_adv: VMS DB View Track Data GUI The 'gui_vms_view_track' function...

harbCoo: Harbours Coordinates Shape File class

Join2shp: Shape File Data Joining - Internal Function

kno2kmh: Knots to Km/h speed conversion function

latsex2dec: Sexagesimal to Decimal Latitude conversion function

log_Cla: LogBook Clustering class

log_DB: LogBook DataBase class

log_File: LogBook File Class

lonsex2dec: Sexagesimal to Decimal Longitude conversion function

plotNet: Neural Network Plotting - Internal Function

polymap: Land Map Shape File class

que_vms_DB: VMS DataBase Query class

rad2deg: Radians to Degree Angles conversion function

saveRawLogBook: Raw LogBook editing function

saveRawVms: Raw VMS editing function

vmsbase: GUI Tools to Process, Analyze and Plot Fisheries Data

vms_DB: VMS DataBase class

vms_File: VMS File Class

Functions

Assign_Area Man page
bathymetry Man page
bathymetry-class Man page
CountMap Man page
gui_dcf_ind Man page
gui_join_lb_vms Man page
gui_lb_db_create Man page
gui_lb_db_edit Man page
gui_lb_db_stat Man page
gui_lb_editraw Man page
gui_lb_met_cla Man page
gui_lb_met_dis Man page
gui_lb_met_edi Man page
gui_main Man page
gui_mark_fis_poi Man page
gui_out_grid Man page
gui_vms_db_are Man page
gui_vms_db_clean Man page
gui_vms_db_create Man page
gui_vms_db_cut Man page
gui_vms_db_dep Man page
gui_vms_db_intr Man page
gui_vmsdb_mixsou Man page
gui_vms_db_sel Man page
gui_vms_db_stat Man page
gui_vms_editraw Man page
gui_vms_met_pred Man page
gui_vms_save_bat Man page
gui_vms_view_intrp Man page
gui_vms_view_ping Man page
gui_vms_view_track Man page
gui_vms_viz_adv Man page
harbCoo Man page
harbCoo-class Man page
Join2shp Man page
kno2kmh Man page
latsex2dec Man page
log_Cla Man page
log_Cla-class Man page
log_DB Man page
log_DB-class Man page
log_File Man page
log_File-class Man page
lonsex2dec Man page
plotNet Man page
polymap Man page
polymap-class Man page
que_vms_DB Man page
que_vms_DB-class Man page
rad2deg Man page
saveRawLogBook Man page
saveRawVms Man page
vmsbase Man page
vmsbase-package Man page
vms_DB Man page
vms_DB-class Man page
vms_File Man page
vms_File-class Man page

Files

inst
inst/img
inst/img/vms_300_spada.png
inst/img/torvergata.png
inst/img/vms_300_spada_ais.png
inst/img/vms_300.png
inst/ico
inst/ico/view-calendar-timeline.png
inst/ico/view-refresh-5.ico
inst/ico/edit-clear-2.png
inst/ico/draw-bezier-curves.png
inst/ico/folder-html.png
inst/ico/media-eject-5.png
inst/ico/map-compass.png
inst/ico/network-server-database.png
inst/ico/download-3.png
inst/ico/dialog-close.png
inst/ico/document-open-remote.png
inst/ico/edit-4.png
inst/ico/insert-link-64.png
inst/ico/adva-vie.png
inst/ico/toggle_log.png
inst/ico/system-wifi.png
inst/ico/dialog-ok-2.png
inst/ico/document-close-3.png
inst/ico/office-chart-scatter.png
inst/ico/db_update.png
inst/ico/document-quick_restart.png
inst/ico/netjaxer.png
inst/ico/folder-man.png
inst/ico/edit-cut-3.png
inst/ico/office-chart-pie.png
inst/ico/document-save-2.ico
inst/ico/folder-yellow.png
inst/ico/folder-orange.png
inst/ico/application-exit-5.png
inst/ico/folder-blue.png
inst/ico/tools-wizard.png
inst/ico/dialog-apply.png
inst/ico/folder-cyan.png
inst/ico/db_status.png
inst/ico/office-chart-area.png
inst/ico/pipe.png
inst/ico/user-available.png
inst/ico/lifejacket.png
inst/ico/edit-add-2.ico
inst/ico/go-down-3.png
inst/ico/db_comit.png
inst/ico/accessories-dictionary.png
inst/ico/preferences-desktop-2.png
inst/ico/google_maps.png
inst/ico/retroshare1.png
inst/ico/db_mix_sou.ico
inst/ico/address-book-new.ico
inst/ico/mark.png
inst/ico/tools-wizard-3.png
inst/ico/user-invisible.png
inst/ico/folder-green.png
inst/ico/folder-download.png
inst/ico/list-remove-4.ico
inst/ico/referencer.png
inst/ico/games-endturn-2.png
inst/ico/internet-web-browser-3.png
inst/ico/address-book-new-4.png
inst/ico/insert-link-2.ico
inst/ico/user-busy.png
inst/ico/blockdevice-2.png
inst/ico/office-chart-ring.png
inst/ico/configure-2.png
inst/ico/document-properties.png
inst/ico/db_add.ico
inst/ico/folder-grey.png
inst/ico/db_remove.png
inst/ico/system-search-5.png
inst/ico/db_add.png
inst/ico/zim-2.png
inst/ico/media-eject-3.png
inst/ico/folder-saved-search.png
inst/ico/folder-red.png
inst/GPL
inst/GPL/LICENSE
inst/extdata
inst/extdata/Sta_met
inst/extdata/EU_CODES_MET.csv
inst/extdata/FAO_CODES_SPECIES.csv
inst/extdata/tacsat_format.rawvms
inst/extdata/EU_MET_DATA.csv
NAMESPACE
R
R/gui_lb_db_edit.R R/gui_lb_db_create.R R/gui_vms_save_bat.R R/gui_vms_met_pred.R R/gui_lb_met_dis.R R/gui_vms_view_track.R R/gui_dcf_ind.R R/fun_vms_db_clean.R R/rad2deg.R R/gui_mark_fis_poi.R R/reference_classes.R R/gui_vms_db_stat.R R/gui_vms_view_ping.R R/lonsex2dec.R R/gui_lb_met_edi.R R/gui_out_grid.R R/fun_view.R R/knots2kmh.R R/gui_lb_met_cla.R R/gui_vms_db_select.R R/saveRawLogBook.R R/gui_vms_db_cut.R R/internal.R R/gui_vms_view_intrp.R R/gui_vms_editraw.R R/latsex2dec.R R/gui_mixsou.R R/gui_vms_viz_adv.R R/gui_main.R R/gui_vms_db_clean.R R/vmsbase.R R/gui_vms_db_dep.R R/gui_vms_db_intr.R R/gui_lb_db_stat.R R/editFun.R R/gui_join_lb_vms.R R/zzz.R R/saveRawVms.R R/gui_vms_db_are.R R/gui_lb_editraw.R R/gui_vms_db_create.R
README.md
MD5
DESCRIPTION
man
man/log_DB.Rd man/CountMap.Rd man/gui_vms_db_clean.Rd man/gui_lb_editraw.Rd man/gui_lb_db_create.Rd man/gui_join_lb_vms.Rd man/gui_vms_db_are.Rd man/polymap.Rd man/Join2shp.Rd man/vmsbase.Rd man/gui_lb_met_cla.Rd man/que_vms_DB.Rd man/Assign_Area.Rd man/gui_dcf_ind.Rd man/vms_DB.Rd man/gui_out_grid.Rd man/latsex2dec.Rd man/vms_File.Rd man/log_Cla.Rd man/gui_vms_view_intrp.Rd man/harbCoo.Rd man/gui_vms_save_bat.Rd man/log_File.Rd man/gui_main.Rd man/gui_lb_db_edit.Rd man/lonsex2dec.Rd man/gui_vms_editraw.Rd man/gui_vms_db_cut.Rd man/gui_vms_viz_adv.Rd man/gui_mark_fis_poi.Rd man/gui_vms_view_track.Rd man/gui_vms_db_stat.Rd man/gui_vms_met_pred.Rd man/gui_vms_db_create.Rd man/saveRawVms.Rd man/gui_vms_db_dep.Rd man/kno2kmh.Rd man/rad2deg.Rd man/gui_lb_met_dis.Rd man/gui_vms_view_ping.Rd man/gui_vms_db_sel.Rd man/plotNet.Rd man/gui_lb_db_stat.Rd man/gui_vmsdb_mixsou.Rd man/gui_lb_met_edi.Rd man/saveRawLogBook.Rd man/bathymetry.Rd man/gui_vms_db_intr.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.