vmsbase: GUI Tools to Process, Analyze and Plot Fisheries Data

The tools you need to process, analyze, combine, integrate and plot your fishery data: the georeferenced dataset from the Vessel Monitoring System (VMS), from the Automatic Information System (AIS) or other tracking devices, as well as the catches or landings dataset from the Logbook or Vessel Register. Package 'vmsbase' is equipped by Viewer Tools to visually inspect data at different steps of the analyses and to produce effective outputs for reports and scientific publications. Viewers are conceived to show the VMS pings, to visualize single or multiple tracks for fishing vessels, or to represent the VMS data on Google Viewer, so that the user can produce easy to interpret and more realistic visualization of both fishing effort and effort behaviour. Package 'vmsbase' represents the implementation of several R routines which have been developed by the "Tor Vergata" University of Rome Team involved in the Italian National Program for the Data Collection Framework for Fisheries Data between 2009-2012.

AuthorLorenzo D'Andrea, Tommaso Russo, Antonio Parisi, Stefano Cataudella
Date of publication2016-06-29 02:51:53
MaintainerLorenzo D'Andrea <support@vmsbase.org>
LicenseGPL (>= 2)
Version2.1.3
http://www.vmsbase.org/

View on CRAN

Man pages

Assign_Area: Assign Area - Internal Function

bathymetry: Bathymetry rData File class

CountMap: Effort Count - Internal Function

gui_dcf_ind: DCF indicators GUI

gui_join_lb_vms: VMS-LB Match GUI

gui_lb_db_create: LogBook DataBase Creation GUI

gui_lb_db_edit: Logbook Editing GUI

gui_lb_db_stat: LogBook DB Status GUI

gui_lb_editraw: Raw LogBook Editing GUI

gui_lb_met_cla: LogBook Metier Classification GUI

gui_lb_met_dis: LogBook Metier Discovery GUI

gui_lb_met_edi: Metier Editing GUI

gui_main: VMSbase main GUI

gui_mark_fis_poi: Mark Fishing Points GUI

gui_out_grid: VMS Effort Gridding GUI

gui_vms_db_are: VMS DB Area Assignment GUI

gui_vms_db_clean: VMS DB Clean GUI The 'gui_vms_db_clean' function implements...

gui_vms_db_create: VMS DataBase Creation GUI

gui_vms_db_cut: VMS DB Cut GUI The 'gui_vms_db_cut' function implements the...

gui_vms_db_dep: VMS DB Depth Assignment GUI The 'gui_vms_db_dep' function...

gui_vms_db_intr: VMS DB Interpolation GUI The 'gui_vms_db_intr' function...

gui_vmsdb_mixsou: VMS DataBase Creation GUI

gui_vms_db_sel: VMS DataBase Select GUI The 'gui_vms_db_sel' function...

gui_vms_db_stat: VMS DataBase Status GUI The 'gui_vms_db_stat' function...

gui_vms_editraw: Raw VMS Editing GUI

gui_vms_met_pred: Predict Metier GUI The 'gui_vms_met_pred' function implements...

gui_vms_save_bat: VMS DB Save Bathymetry GUI The 'gui_vms_save_bat' function...

gui_vms_view_intrp: VMS DB View Interpolated Data GUI The 'gui_vms_view_intrp'...

gui_vms_view_ping: VMS DB View Raw Ping Data GUI The 'gui_vms_view_ping'...

gui_vms_view_track: VMS DB View Track Data GUI The 'gui_vms_view_track' function...

gui_vms_viz_adv: VMS DB View Track Data GUI The 'gui_vms_view_track' function...

harbCoo: Harbours Coordinates Shape File class

Join2shp: Shape File Data Joining - Internal Function

kno2kmh: Knots to Km/h speed conversion function

latsex2dec: Sexagesimal to Decimal Latitude conversion function

log_Cla: LogBook Clustering class

log_DB: LogBook DataBase class

log_File: LogBook File Class

lonsex2dec: Sexagesimal to Decimal Longitude conversion function

plotNet: Neural Network Plotting - Internal Function

polymap: Land Map Shape File class

que_vms_DB: VMS DataBase Query class

rad2deg: Radians to Degree Angles conversion function

saveRawLogBook: Raw LogBook editing function

saveRawVms: Raw VMS editing function

vmsbase: GUI Tools to Process, Analyze and Plot Fisheries Data

vms_DB: VMS DataBase class

vms_File: VMS File Class

Files in this package

vmsbase
vmsbase/inst
vmsbase/inst/img
vmsbase/inst/img/vms_300_spada.png
vmsbase/inst/img/torvergata.png
vmsbase/inst/img/vms_300_spada_ais.png
vmsbase/inst/img/vms_300.png
vmsbase/inst/ico
vmsbase/inst/ico/view-calendar-timeline.png
vmsbase/inst/ico/view-refresh-5.ico
vmsbase/inst/ico/edit-clear-2.png
vmsbase/inst/ico/draw-bezier-curves.png
vmsbase/inst/ico/folder-html.png
vmsbase/inst/ico/media-eject-5.png
vmsbase/inst/ico/map-compass.png
vmsbase/inst/ico/network-server-database.png
vmsbase/inst/ico/download-3.png
vmsbase/inst/ico/dialog-close.png
vmsbase/inst/ico/document-open-remote.png
vmsbase/inst/ico/edit-4.png
vmsbase/inst/ico/insert-link-64.png
vmsbase/inst/ico/adva-vie.png
vmsbase/inst/ico/toggle_log.png
vmsbase/inst/ico/system-wifi.png
vmsbase/inst/ico/dialog-ok-2.png
vmsbase/inst/ico/document-close-3.png
vmsbase/inst/ico/office-chart-scatter.png
vmsbase/inst/ico/db_update.png
vmsbase/inst/ico/document-quick_restart.png
vmsbase/inst/ico/netjaxer.png
vmsbase/inst/ico/folder-man.png
vmsbase/inst/ico/edit-cut-3.png
vmsbase/inst/ico/office-chart-pie.png
vmsbase/inst/ico/document-save-2.ico
vmsbase/inst/ico/folder-yellow.png
vmsbase/inst/ico/folder-orange.png
vmsbase/inst/ico/application-exit-5.png
vmsbase/inst/ico/folder-blue.png
vmsbase/inst/ico/tools-wizard.png
vmsbase/inst/ico/dialog-apply.png
vmsbase/inst/ico/folder-cyan.png
vmsbase/inst/ico/db_status.png
vmsbase/inst/ico/office-chart-area.png
vmsbase/inst/ico/pipe.png
vmsbase/inst/ico/user-available.png
vmsbase/inst/ico/lifejacket.png
vmsbase/inst/ico/edit-add-2.ico
vmsbase/inst/ico/go-down-3.png
vmsbase/inst/ico/db_comit.png
vmsbase/inst/ico/accessories-dictionary.png
vmsbase/inst/ico/preferences-desktop-2.png
vmsbase/inst/ico/google_maps.png
vmsbase/inst/ico/retroshare1.png
vmsbase/inst/ico/db_mix_sou.ico
vmsbase/inst/ico/address-book-new.ico
vmsbase/inst/ico/mark.png
vmsbase/inst/ico/tools-wizard-3.png
vmsbase/inst/ico/user-invisible.png
vmsbase/inst/ico/folder-green.png
vmsbase/inst/ico/folder-download.png
vmsbase/inst/ico/list-remove-4.ico
vmsbase/inst/ico/referencer.png
vmsbase/inst/ico/games-endturn-2.png
vmsbase/inst/ico/internet-web-browser-3.png
vmsbase/inst/ico/address-book-new-4.png
vmsbase/inst/ico/insert-link-2.ico
vmsbase/inst/ico/user-busy.png
vmsbase/inst/ico/blockdevice-2.png
vmsbase/inst/ico/office-chart-ring.png
vmsbase/inst/ico/configure-2.png
vmsbase/inst/ico/document-properties.png
vmsbase/inst/ico/db_add.ico
vmsbase/inst/ico/folder-grey.png
vmsbase/inst/ico/db_remove.png
vmsbase/inst/ico/system-search-5.png
vmsbase/inst/ico/db_add.png
vmsbase/inst/ico/zim-2.png
vmsbase/inst/ico/media-eject-3.png
vmsbase/inst/ico/folder-saved-search.png
vmsbase/inst/ico/folder-red.png
vmsbase/inst/GPL
vmsbase/inst/GPL/LICENSE
vmsbase/inst/extdata
vmsbase/inst/extdata/Sta_met
vmsbase/inst/extdata/EU_CODES_MET.csv
vmsbase/inst/extdata/FAO_CODES_SPECIES.csv
vmsbase/inst/extdata/tacsat_format.rawvms
vmsbase/inst/extdata/EU_MET_DATA.csv
vmsbase/NAMESPACE
vmsbase/R
vmsbase/R/gui_lb_db_edit.R vmsbase/R/gui_lb_db_create.R vmsbase/R/gui_vms_save_bat.R vmsbase/R/gui_vms_met_pred.R vmsbase/R/gui_lb_met_dis.R vmsbase/R/gui_vms_view_track.R vmsbase/R/gui_dcf_ind.R vmsbase/R/fun_vms_db_clean.R vmsbase/R/rad2deg.R vmsbase/R/gui_mark_fis_poi.R vmsbase/R/reference_classes.R vmsbase/R/gui_vms_db_stat.R vmsbase/R/gui_vms_view_ping.R vmsbase/R/lonsex2dec.R vmsbase/R/gui_lb_met_edi.R vmsbase/R/gui_out_grid.R vmsbase/R/fun_view.R vmsbase/R/knots2kmh.R vmsbase/R/gui_lb_met_cla.R vmsbase/R/gui_vms_db_select.R vmsbase/R/saveRawLogBook.R vmsbase/R/gui_vms_db_cut.R vmsbase/R/internal.R vmsbase/R/gui_vms_view_intrp.R vmsbase/R/gui_vms_editraw.R vmsbase/R/latsex2dec.R vmsbase/R/gui_mixsou.R vmsbase/R/gui_vms_viz_adv.R vmsbase/R/gui_main.R vmsbase/R/gui_vms_db_clean.R vmsbase/R/vmsbase.R vmsbase/R/gui_vms_db_dep.R vmsbase/R/gui_vms_db_intr.R vmsbase/R/gui_lb_db_stat.R vmsbase/R/editFun.R vmsbase/R/gui_join_lb_vms.R vmsbase/R/zzz.R vmsbase/R/saveRawVms.R vmsbase/R/gui_vms_db_are.R vmsbase/R/gui_lb_editraw.R vmsbase/R/gui_vms_db_create.R
vmsbase/README.md
vmsbase/MD5
vmsbase/DESCRIPTION
vmsbase/man
vmsbase/man/log_DB.Rd vmsbase/man/CountMap.Rd vmsbase/man/gui_vms_db_clean.Rd vmsbase/man/gui_lb_editraw.Rd vmsbase/man/gui_lb_db_create.Rd vmsbase/man/gui_join_lb_vms.Rd vmsbase/man/gui_vms_db_are.Rd vmsbase/man/polymap.Rd vmsbase/man/Join2shp.Rd vmsbase/man/vmsbase.Rd vmsbase/man/gui_lb_met_cla.Rd vmsbase/man/que_vms_DB.Rd vmsbase/man/Assign_Area.Rd vmsbase/man/gui_dcf_ind.Rd vmsbase/man/vms_DB.Rd vmsbase/man/gui_out_grid.Rd vmsbase/man/latsex2dec.Rd vmsbase/man/vms_File.Rd vmsbase/man/log_Cla.Rd vmsbase/man/gui_vms_view_intrp.Rd vmsbase/man/harbCoo.Rd vmsbase/man/gui_vms_save_bat.Rd vmsbase/man/log_File.Rd vmsbase/man/gui_main.Rd vmsbase/man/gui_lb_db_edit.Rd vmsbase/man/lonsex2dec.Rd vmsbase/man/gui_vms_editraw.Rd vmsbase/man/gui_vms_db_cut.Rd vmsbase/man/gui_vms_viz_adv.Rd vmsbase/man/gui_mark_fis_poi.Rd vmsbase/man/gui_vms_view_track.Rd vmsbase/man/gui_vms_db_stat.Rd vmsbase/man/gui_vms_met_pred.Rd vmsbase/man/gui_vms_db_create.Rd vmsbase/man/saveRawVms.Rd vmsbase/man/gui_vms_db_dep.Rd vmsbase/man/kno2kmh.Rd vmsbase/man/rad2deg.Rd vmsbase/man/gui_lb_met_dis.Rd vmsbase/man/gui_vms_view_ping.Rd vmsbase/man/gui_vms_db_sel.Rd vmsbase/man/plotNet.Rd vmsbase/man/gui_lb_db_stat.Rd vmsbase/man/gui_vmsdb_mixsou.Rd vmsbase/man/gui_lb_met_edi.Rd vmsbase/man/saveRawLogBook.Rd vmsbase/man/bathymetry.Rd vmsbase/man/gui_vms_db_intr.Rd

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