data_opt: Create options for data import

In xpose: Diagnostics for Pharmacometric Models

Create options for data import

Description

Provide a list of options to the general plotting functions such as xplot_scatter in order to create appropriate data input for ggplot2.

Usage

data_opt(
  .problem = NULL,
  .subprob = NULL,
  .method = NULL,
  .source = "data",
  simtab = FALSE,
  filter = NULL,
  tidy = FALSE,
  index_col = NULL,
  value_col = NULL,
  post_processing = NULL
)

Arguments

.problem	The problem to be used, by default returns the last one.
.subprob	The subproblem to be used, by default returns the last one.
.method	The estimation method to be used, by default returns the last one.
.source	Define the location of the data in the xpdb. Should be either 'data' to use the output tables or the name of an output file attached to the xpdb.
simtab	Only used when 'data' is defined as the source and '.problem' is default. Should the data be coming from an estimation or a simulation table.
filter	A function used to filter the data e.g. filter = function(x) x[x$TIME > 20, ] where x is the data.
tidy	Logical, whether the data should be transformed to tidy data.
index_col	Only used when 'tidy' is defined a TRUE and value_col is NULL. Column names to use as index when tidying the data.
value_col	Only used when 'tidy' is defined a TRUE and index_col is NULL. Column names to be stacked when tidying the data.
post_processing	A function used to modify the data after it has been tidied up e.g. post_processing = function(x) dplyr::mutate(.data = x, variable = as.factor(.$variable)) where x is the tidy data.

See Also

xplot_distrib xplot_qq xplot_scatter

Examples

data_opt(.problem = 1, .source = 'data', simtab = TRUE)

xpose documentation built on May 29, 2024, 5:12 a.m.