get_file: Access model output file data

In xpose: Diagnostics for Pharmacometric Models

Access model output file data

Description

Access model output file data from an xpdb object.

Usage

get_file(
  xpdb,
  file = NULL,
  ext = NULL,
  .problem = NULL,
  .subprob = NULL,
  .method = NULL,
  quiet
)

Arguments

xpdb	An xpose_data object from which the model output file data will be extracted.
file	Full name of the file to be extracted from the xpdb e.g. 'run001.phi'. Alternative to the 'ext' argument.
ext	Extension of the file to be extracted from the xpdb e.g. 'phi'. Alternative to the 'file' argument.
.problem	The problem to be used, by default returns the last one for each file.
.subprob	The subproblem to be used, by default returns the last one for each file.
.method	The estimation method to be used (e.g. 'foce', 'imp', 'saem'), by default returns the last one for each file.
quiet	Logical, if FALSE messages are printed to the console.

Value

A tibble for single file or a named list for multiple files.

See Also

list_files, xpose_data, read_nm_files

Examples

# Single file (returns a tibble)
ext_file <- get_file(xpdb_ex_pk, file = 'run001.ext')
ext_file

# Multiple files (returns a list)
files <- get_file(xpdb_ex_pk, file = c('run001.ext', 'run001.phi'))
files

# Tip to list available files in the xpdb
print(xpdb_ex_pk)

xpose documentation built on May 29, 2024, 5:12 a.m.