hla_hist: Blood type probes

In 3inar/nowaclean: Methods for Standardized Data Cleaning in the Norwegian Women and Cancer Group

Description

Returns a list of probes that cover HLA genes. These are usually strongly expressed and it may sometimes be desirable to remove them before analysis. The function blood_probes() is a wrapper to this function with a friendlier name.

Usage

hla_hist()

blood_probes()

Value

A character vector of nuIDs. If you for some reason want to find the Illumina IDs behind these nuIDs you can use names() on the returned vector.

Functions

• blood_probes: A more descriptive name for hla_hist

Source

The Genomics Core Facility, NTNU https://www.ntnu.edu/dmf/gcf

Examples

## nuIDs:
hla_hist()

## Illumina IDs:
names(hla_hist())

3inar/nowaclean documentation built on May 5, 2019, 10:44 a.m.