Files in 47Lies/isoformnspectRe
Companion package of a nextflow pipeline
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.gitignore
DESCRIPTION
NAMESPACE
R/BlastCoordPlotly.R
R/CompareTwoSequences.R
R/DATAFRAME_MakeALineForAIsoProt.R
R/GetRangesFromUniprot.R
R/HTML.R
R/LIST_ComputeDatatableOptions.R
R/LIST_INDEX_VECTOR_GetMatchs.R
R/Render.R
R/STRING_ProteinShortName.R
R/Server.R
R/UI.R
README.md
inst/extdata/Global.R
inst/extdata/IsoAndSpe.css
inst/extdata/IsoAndSpe.png
inst/extdata/SampleDescription.txt
inst/extdata/blast_rescue.example.txt
inst/extdata/peptides.example.txt
inst/extdata/protein_bank.example.fasta
inst/rmd/BlastSkeleton.V2.Rmd
inst/rmd/ComputeResultsForOnePipeline.skeleton.Rmd
inst/rmd/PerfectIsoformSkeleton.V2.Rmd
inst/rmd/RegularProteinSkeleton.V2.Rmd
isoformnspectRe.Rproj
man/BlastCoordPlotly.Rd
man/CollapseSpanRanges.Rd
man/CompareTwoSequences.Rd
man/DATAFRAME_MakeALineForABlastProt.Rd
man/DATAFRAME_MakeALineForAIsoProt.Rd
man/DATATABLE_AnnotateProteotypic.Rd
man/GetEmptySpanRanges.Rd
man/GetRangesFromUniprot.Rd
man/HTML_HandleEndOfLine.Rd
man/HTML_PrettyBlastSequence.Rd
man/HTML_Pretty_Sequence.Rd
man/HTML_VECTOR_Peptide2Popover.Rd
man/HandleFoldChange.Rd
man/LIST_ComputeDatatableOptions.Rd
man/LIST_INDEX_VECTOR_GetMatchs.Rd
man/LocalOptions.Rd
man/RenderABlast.Rd
man/RenderARegular.Rd
man/RenderAnIsoform.Rd
man/STRING_ProteinShortName.Rd
man/SplitSpanRanges.Rd
man/TrimSequenceOutput.Rd
man/UI.Rd
man/UpdateSequence.Rd
man/server.Rd
