CollapseSpanRanges: CollapseSpanRanges Handle a set of range to have only one...
In 47Lies/isoformnspectRe: Companion package of a nextflow pipeline
Description
Usage
Arguments
Value
Examples
View source: R/GetRangesFromUniprot.R
Description
CollapseSpanRanges Handle a set of range to have only one range per position. This will allow us to use the
Usage
1
CollapseSpanRanges(SpanRanges)
Arguments
SpanRanges
IRanges that will be used for HMTL formatting
Value
IRanges with class and title information for HTML span tag
Examples
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library(GenomicRanges)
VariationRanges<-GetRangesFromUniprot("O94875-10")
VariationRanges
DuplicatedVariationRanges<-VariationRanges
mcols(DuplicatedVariationRanges)$Title<-paste("Duplicated ",mcols(DuplicatedVariationRanges)$Title)
VariationRanges<-c(VariationRanges,DuplicatedVariationRanges)
Collapsed<-CollapseSpanRanges(VariationRanges)
VariationRanges
Collapsed
47Lies/isoformnspectRe documentation built on May 29, 2021, 3 p.m.
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Description Usage Arguments Value Examples
View source: R/GetRangesFromUniprot.R
Description
CollapseSpanRanges Handle a set of range to have only one range per position. This will allow us to use the
Usage
1 | CollapseSpanRanges(SpanRanges)
|
Arguments
SpanRanges |
IRanges that will be used for HMTL formatting |
Value
IRanges with class and title information for HTML span tag
Examples
1 2 3 4 5 6 7 8 9 10 | library(GenomicRanges)
VariationRanges<-GetRangesFromUniprot("O94875-10")
VariationRanges
DuplicatedVariationRanges<-VariationRanges
mcols(DuplicatedVariationRanges)$Title<-paste("Duplicated ",mcols(DuplicatedVariationRanges)$Title)
VariationRanges<-c(VariationRanges,DuplicatedVariationRanges)
Collapsed<-CollapseSpanRanges(VariationRanges)
VariationRanges
Collapsed
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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