HTML_VECTOR_Peptide2Popover: Alter a peptide sequence to have an harmonious presentation

In 47Lies/isoformnspectRe: Companion package of a nextflow pipeline

Description

Alter a peptide sequence to have an harmonious presentation

Usage

HTML_VECTOR_Peptide2Popover(Sequences, MaxNChar = 15)

Arguments

Sequences	Vector of peptides Sequence
MaxNChar	Maximum width size of the peptide

Value

string vector as a HTML span to have shorter form

Examples

library("DT")
library("data.table")
P_FilePath <- system.file("extdata",
 "peptides.example.txt",
  package = "isoformnspectRe")
Peptides<-fread(
 P_FilePath,
 integer64="double")
Peptides<-Peptides[,c("Sequence",
"Start position","End position")]
datatable(Peptides)
Peptides$Sequence<-HTML_VECTOR_Peptide2Popover(Peptides$Sequence)
datatable(Peptides,escape=FALSE,
options=list(
 drawCallback=JS(
 paste("$('[data-toggle=\"popover\"]').popover({container: 'body'});")
 )))

47Lies/isoformnspectRe documentation built on May 29, 2021, 3 p.m.