fastagrab: fastagrab() extracts a fasta sequence from a multi fasta file
In A-BN/fastaUtils: Simple fasta exploration and manipulation
fastagrab R Documentation
fastagrab() extracts a fasta sequence from a multi fasta file
Description
description
Usage
fastagrab(fasta_file, contig_regexp = ".*", min_size = 0)
Arguments
contig_regexp
regexp of the sequence to extract (with or without '>')
fasta
path of the fasta file
out_fasta
name and full path of the file in
which to write the extracted sequence
Value
nothing
A-BN/fastaUtils documentation built on March 29, 2023, 10:49 p.m.
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| fastagrab | R Documentation |
fastagrab() extracts a fasta sequence from a multi fasta file
Description
description
Usage
fastagrab(fasta_file, contig_regexp = ".*", min_size = 0)
Arguments
contig_regexp |
regexp of the sequence to extract (with or without '>') |
fasta |
path of the fasta file |
out_fasta |
name and full path of the file in which to write the extracted sequence |
Value
nothing
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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