arraynorm: Normalises methylation array data
In AGRF/arraydm: AGRF Differential Methylation Analysis Package
Description
Usage
Arguments
Value
Description
Normalises methylation array data
Usage
1
Arguments
contractid
Character. The name of the contract
arraydata
An RGChannelSet generated manually, or in arraydm::readdata()
mdataraw
Data Frame. A filtered data frame of M-values
sampledata
Data Frame. The project samplesheet, generate manually or in arraydm::readdata()
workdir
Character. Where to save the plots. (Default: working directory)
Value
PreQC plots for detection p-value, quality filtered probe set. 'swannorm' global object.
AGRF/arraydm documentation built on Dec. 2, 2020, 12:14 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
Normalises methylation array data
Usage
1 |
Arguments
contractid |
Character. The name of the contract |
arraydata |
An RGChannelSet generated manually, or in arraydm::readdata() |
mdataraw |
Data Frame. A filtered data frame of M-values |
sampledata |
Data Frame. The project samplesheet, generate manually or in arraydm::readdata() |
workdir |
Character. Where to save the plots. (Default: working directory) |
Value
PreQC plots for detection p-value, quality filtered probe set. 'swannorm' global object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.