NormOffsetsFromTxLength: Combine AveTxLen with norm.factors into offsets

Description Usage Arguments Author(s)

View source: R/src_NormOffsetsFromTxLength.R

Description

Wrapper around https://bioconductor.org/packages/release/bioc/vignettes/tximport/inst/doc/tximport.html#edger Combine edgeR normalization factors with average transcript length and obtain norm. offsets for downstream use.

Usage

1
NormOffsetsFromTxLength(cts, len, norm_method = "TMM")

Arguments

cts

count matrix

len

length matrix

norm_method

norm method from edgeR::calcNormFactors

Author(s)

Alexander Toenges


ATpoint/diffanalyseR documentation built on Oct. 8, 2021, 10:11 p.m.