string2chr: Convert strsplit to data.frame

In ATpoint/diffanalyseR: Wrapper functions for common tasks related to analysis of NGS counts data

Description

Assuming coordinates such as chr:start-end, function splits at delimiters and produces data.frame output. Uses 'data.table::tstrsplit' internally.

Usage

string2chr(
  x,
  pattern = ":|-",
  chr.name = "chr",
  start.name = "start",
  end.name = "end"
)

Arguments

x	input string(s)
pattern	pattern to split string at. Can be regexed.
chr.name	name for chr
start.name	name for start
end.name	name for end

Author(s)

Alexander Toenges

Examples

strs <- c("chr1:1-10", "chr2:2-20")
string2chr(strs, ":|-")

ATpoint/diffanalyseR documentation built on Oct. 8, 2021, 10:11 p.m.