Man pages for AdrianHordyk/LBSPR
Length-Based Spawning Potential Ratio
| calcCurves | Calculate Relative Yield, YPR, SPR, SSB, and Recruitment... |
| DataDir | Report the location of the Data Files |
| FilterSmooth | Kalman filter and Rauch-Tung-Striebel smoother |
| getFMfun | Calculate F/M given SPR and other parameters |
| initialize-LB_lengths-method | Create a new LB_lengths object |
| initialize-LB_obj-method | Create a new LB_obj object |
| initialize-LB_pars-method | Create a new LB_pars object |
| LB_lengths-class | An S4 class containing length data |
| LB_obj-class | An S4 class containing all parameters for the LBSPR model |
| LB_pars-class | An S4 class containing life history and other parameters |
| LBSPRfit | Fit LBSPR model to length data |
| LBSPRfit_ | Internal function to fit LBSPR model to length data |
| LBSPR_NLLabsel | LBSPR Optimization function for age-based selectivity model |
| LBSPR_NLLgtg | LBSPR Optimization function for GTG model |
| LBSPRopt | Optimisation Routine for fitting LBSPR |
| LBSPRsim | LBSPR Simulation Model |
| LBSPRsim_ | Internal LBSPR Simulation Model |
| plotCurves | Plot the Relative Yield, YPR, SPR, SSB, and Recruitment... |
| plotEsts | Plot LBSPR model estimates |
| plotMat | Plot the maturity-at-length and selectivity-at-length curves |
| plotSim | General plotting function for simulated data |
| plotSize | Plot the size data and model fits |
| plotSPRCirc | Circle of estimated SPR and target and limit points |
| plotTarg | Plot sampled length structure against target simulated size... |
| Shiny | Run a Shiny Application |
