Man pages for Albluca/ElPiGraph.R
Elastic principal graph construction

accuracyComplexityPlotTitle
AddNode2NodeAdds a node to each graph node
circle_dataPoints on a circle
computeElasticPrincipalCircleConscruct a princial elastic circle
computeElasticPrincipalCurveConscruct a princial elastic curve
computeElasticPrincipalGraphRegularize data and construct a principal elastic graph
computeElasticPrincipalTreeConscruct a princial elastic tree
ComputeRelativeChangeOfNodePositionsReplaced by a C++ function
ComputeSpringLaplacianMatrixCompute the Laplacian matrix
ConstructGraphTitle
DecodeElasticMatrixConverts ElasticMatrix into a set of edges and vectors of...
EdgeCatAssociationTitle
ElPrincGraphCore function to contract a principal elestic graph
Encode2ElasticMatrixCreate an Elastic matrix from a set of edges
ExploreBranchingTitle
ExploreNeiInteractivelly look at data
generateInitialConfigurationProduce an initial graph with a given structure
GetBranchesTitle
getPrimitiveGraphStructureBarCodeTitle
getPseudotimeEx
GetSubGraphTitle
helloHello, World!
InferTrimRadiusTitle
MakeUniformElasticMatrixThe R fucntion has been replaced by the faster C++ version
NodeDimensionalityTitle
PartitionDataAssign data points to a set of nodes
plotMSDEnergyPlotPlot the MSD VS Energy plot
PlotPGPlot data and principal graph
plotPieNet#' Title #' #' #' @param Data #' @param PrintGraph #' @param...
PlotShinyAuxiliary function used by the shiny interface
PrimitiveElasticGraphEmbedmentFunction fitting a primitive elastic graph to the data
project_point_onto_edgeTitle
project_point_onto_graphTitle
RearrangePlotInteractivelly modify data
SelectDimensionsTitle
StudyBranchingTitle
StudyOverDispersionTitle
tree_data-namePoints on a tree
Albluca/ElPiGraph.R documentation built on Nov. 18, 2017, 5:09 a.m.