Files in Alethere/SmoothDescent
Application of map-based genotype correction algorithm Smooth Descent
.Rbuildignore
.gitignore
DESCRIPTION
Meta/vignette.rds
NAMESPACE
R/Utils.R
R/calc_IBD.R
R/data_documents.R
R/diagnostics.R
R/geno_predict.R
R/mapping.R
R/pred_IBD.R
R/smooth_wrapper.R
README.md
data/genotype.rda
data/homologue.rda
data/iter_smooth_descent.rda
data/linkage.rda
data/map.rda
data/smooth_descent.rda
doc/SmoothDescent_vignette.R
doc/SmoothDescent_vignette.Rmd
doc/SmoothDescent_vignette.html
man/calc_IBD.Rd
man/config.Rd
man/extract.Rd
man/faster_IBD.Rd
man/geno.Rd
man/genotype.Rd
man/graphical_genotype.Rd
man/hom.Rd
man/iterplot.Rd
man/linkdf.Rd
man/linkdf_shortcut.Rd
man/map.Rd
man/mdsmap.Rd
man/naive_IBD.Rd
man/predict_IBD.Rd
man/r_from_dist.Rd
man/rec_count.Rd
man/recdist_calc.Rd
man/reorder_tau.Rd
man/rowfuse.Rd
man/sd_iter.Rd
man/sdescent.Rd
man/smooth_descent.Rd
man/smooth_map.Rd
man/smooth_map_iter.Rd
vignettes/SmoothDescent_vignette.Rmd
