calculateFPKMMatrix: calculate FPKM from countTable and coldata
In AlexHelloWorld/DifferentialAndSurvivalAnalysis:
Description
Usage
Arguments
Value
Description
calculate FPKM from countTable and coldata
Usage
1
calculateFPKMMatrix(countTable, coldata, geneInfo)
Arguments
countTable
a raw read count table
coldata
an annotation table for samples, must include attributes naming "barcode", "patient_barcode", "survival", "vital_status", "total_count", "cohort"
geneInfo
an annotation table for genes, must include attribute nameing "gene_length"
Value
FPKM matrix
AlexHelloWorld/DifferentialAndSurvivalAnalysis documentation built on June 1, 2019, 3:51 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
calculate FPKM from countTable and coldata
Usage
1 | calculateFPKMMatrix(countTable, coldata, geneInfo)
|
Arguments
countTable |
a raw read count table |
coldata |
an annotation table for samples, must include attributes naming "barcode", "patient_barcode", "survival", "vital_status", "total_count", "cohort" |
geneInfo |
an annotation table for genes, must include attribute nameing "gene_length" |
Value
FPKM matrix
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.